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Detailed information on CNT30496615


BLAST search results

BLAST vs Swiss-Prot:
sp|P50378|EFTU_GONPE, E-value = 8e-13

BLAST vs NONCODE:
NONGMAT001703, E-value = 3e-77

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618435Digitaria exilisSesamum indicum45.9884.9386.81417forward
CNT30629544Digitaria exilisVigna unguiculata66.9280.2984.51607forward
CNT30503993Digitaria exilisNicotiana attenuata20.7368.3691.49188forward
CNT30721807Digitaria exilisTriticum spelta31.7532.0488.54288forward
CNT30116376Digitaria exilisOryza nivara27.2345.4993.52247forward
CNT30724009Digitaria exilisLupinus angustifolius69.1357.7383.41627forward

Expression of CNT30496615

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MTPTATVCLMSRTAKRPRGGYSEKVSTTMGLVGIIFTIPASPFFRNLGSFSSSLPDRLSILVTSSANLTAMWEVWQSRTGA*

Sequence

>CNT30496615
GATCATTTAACAAGTCGTAACAAAAATAGGATAACAAAGACCAAACTTGGATAATAAGTCTCACGACGATGCATTTAACGACGTCCAGAAGGGCACACGT
CTTCGAGCATTCACGTTTTGCCCAAGCTGACATATAACAAGAGGTACCTAAACAACAGGCAAATGGCACACCGCCACCAAAGCTCAACAGTTCACACGAT
AACAGCAATGACCCCCGGCAAAACTTAGGTGATAATGAAAAGAGATCTAGGTATCTAGACAGCAGGATTAACCACCAGGCACATCATTTCTTCTTGGCAG
CAGCCTTGGTCACCTTGGCACCAGTCGGGTCCTTCTTCTCCACGCTCTTGATGACTCCAACAGCAACAGTTTGCCTCATGTCACGGACGGCAAAACGACC
AAGAGGAGGGTACTCAGAGAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACCATACCAGCATCACCGTTCTTCAGGAACTTGGGCTCCTTC
TCAAGCTCCTTACCAGATCGCCTGTCGATCTTGGTAACAAGCTCAGCAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCCAGAACTGGGGCATAGCCGG
TCATCCTTGGAGTTGGAAGCCACATACCCACGCTTGAGATCCTTCACGGCGACGTTCTTCACGTTGAAGCCAACATTGTCACCAGGAAGGGCCTCCTGGA
GAGCCTCGTGGTGCATCTCAACAGACTTCACCTCAGTGGTCAGGCCAGTTGGCCCAAAGGTGACAACCATACCAGGCTTGATGATACCGGTCTCAACACG
ACCAACAGGGACAGTTCCAATACCACCAATCTTGTACACATCCTGAAGGGGGAGACGCAGGGGCTTGTCCGAAGGCCTCTTGGGCTCGTTGATCTGGTCA
AGGGCCT