Detailed information on CNT30495872


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184327Digitaria exilisSecale cereale8.4166.284.4141forward
CNT30398990Digitaria exilisTriticum turgidum7.3928.9787.1124forward
CNT30459409Digitaria exilisSaccharum spontaneum8.4139.8395.74141forward
CNT30716144Digitaria exilisMalus domestica golden3.8221.0589.0664forward
CNT30583813Digitaria exilisEchinochloa crusgalli6.6833.9493.75112forward

Expression of CNT30495872

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MRQELHYLQGSHKINWRIILVAFLQVVQLLPQACCLPLPELQVKQGGLLA*

>peptide 2 (87 aa)
MMMAAAASPGDNNRCAAGFFYGRKGGWTENVRLQLHGHGMRAAPQQHVAEAEAGTASGFMPRGQAIRQKLNLKNFTHHSGGLLVQPL*

>peptide 3 (47 aa)
MVPSSLTLVAIAHSRGGVNYHYAHWPVLGWKFRWVAYSVILDAYSNH*

>peptide 4 (44 aa)
RSDWTKYCSSHAPLPTPVAFKISGVDVAAYAATNPSPPPQLTTR*

>peptide 5 (40 aa)
GLIGQSTARPTLHCRHLLRLKSQASTWPRTQPQTLAPRRN*

>peptide 6 (29 aa)
MTADLPILSQRNSMLIFLYSFIVFVCVDG*

Sequence

>CNT30495872
CGGTCTGATTGGACAAAGTACTGCTCGTCCCACGCTCCACTGCCGACACCTGTTGCGTTTAAAATCTCAGGCGTCGACGTGGCCGCGTACGCAGCCACAA
ACCCTAGCCCCCCGCCGCAATTAACAACCCGCTAATCCCCCAAATCCCACGCTAATCACCCGCTAAGCCGCTCTCTCTCTCCGCCGGAAAGCCAATCCCG
CCGCATCACCCCTCTCGCTTTTCATATCTCCACTTGTGCGGGTTGGGTTCTAGACTCGTCGATTCGGTTTCGATCCTTCTAGACATTTCGCCGCCCCCGC
TATAAAAGCCGGCACCTCCGAGGCCATCGATCGGCACATCAGCGCTCGCACACAGCTCATTGGCGGGCCAGATGGAACTCGCGGGGGATTCCAAGCTATC
GGCGAATTGCATGTGGCGGCACCAAGCATGAGGCAGGAACTGCATTACTTGCAAGGAAGTCACAAAATCAACTGGAGGATAATACTTGTGGCTTTCTTGC
AAGTTGTGCAGTTGTTGCCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTACAAGTGAAACAAGGAGGGCTTCTGGCTTGATATCGTCTAACACGCAGTGG
ATCACCAGAAAGTGTGAAAGCAAATGCATGCCATAACCTTCACTGTCAAATGCATGCCATAACCTTCATTACCATGCGGCCCGTAGGTGACCATTTAGTT
TCATGATAATTACAAAAGAAAAAGTCATCAGGAACTGACGCTTCGTATGCACCTAATGCTGCTCTTCCAGCTGACATTTAACCATGATATCAGTCTCATT
TTCACAAATGTCAGTTAGTTACAACATCTAATTGTGTTGGTTGTCGAAGTATTTGATATTTTAATGTCCCTTAACCTGTGCCAATGACATAGTTTCAGTT
ACTTCTTAGAAAATGTATAATTTTATATGGTGCCATCTTCTTTAACTTTAGTTGCCATAGCCCATAGCAGGGGTGGTGTGAACTATCACTATGCCCATTG
GCCAGTTCTTGGATGGAAGTTTAGATGGGTCGCATATTCAGTAATTTTGGATGCGTATAGTAATCACTGAGCTCAGTCCTAAACTAATGGGGCCTTGTGC
TTGTCTTTGCTTTGTTGCATTCATCTTTTTTTTCTAGGATCAACCTTTGGGAGTGACTTGGTTTTGACCATTTTTTTCTGGGTATGATGATGGCTGCAGC
AGCAAGCCCGGGTGACAACAATCGTTGCGCGGCTGGTTTTTTCTACGGCAGAAAAGGAGGCTGGACAGAGAATGTTCGACTACAGCTGCATGGGCATGGC
ATGCGTGCAGCACCTCAGCAGCACGTAGCAGAAGCAGAGGCGGGCACAGCCAGTGGCTTCATGCCACGTGGTCAAGCAATAAGGCAGAAGTTAAACCTCA
AGAATTTCACTCATCACTCTGGAGGTTTATTAGTACAACCTTTGTAAAAGCTCTTGATTGAAGCATGACAGCTGATTTGCCTATACTGTCGCAGAGAAAT
TCTATGCTCATTTTTCTTTATTCATTTATCGTTTTTGTCTGCGTGGATGGATAAAGACTAGTTAAGCTTATGAAAAACAGCAGATTACTGTCAGGACTGC
AAGCATGGGCAGTAGGGGGCTTTCCAATCTAGGCCCCCTAGAATGTCAAACAGAACTCAGGCCCGGTTTAGTTTCCA