Detailed information on CNT30495795


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519956Digitaria exilisSetaria italica23.7434.9886.67390forward
CNT30254744Digitaria exilisAvena sativa12.931.0484.91212forward
CNT30686530Digitaria exilisTriticum urartu5.5438.7287.9191forward
CNT30364370Digitaria exilisSorghum bicolor13.7627.188.05226forward

Expression of CNT30495795

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MAAEPEDPSKIRLEKRTKESSRQRKEGREGGEATAARGRGANPRKKMGREREQCEEERVAV*

>peptide 2 (62 aa)
MLFPSDPTAHQALTIHRSIHPVGHTGATGDQEVEETRQEGDDFRGADTGPAVACRGRVGGEL*

>peptide 3 (57 aa)
MHPVVERVVGSEHRRRHGRGTRRPEQDSIGEENKGVFETKKRGTRRRRGYRRKGKGG*

>peptide 4 (39 aa)
MRRRQRRPRVASDSARRRKKAGMGRELGSGAAAENAGPA*

>peptide 5 (29 aa)
MRGGTGRGVRRLIWSGDEEVGIREACVATT

Sequence

>CNT30495795
GAATGGAAGCATGATCACAAGAGAAGCATAAACTCATAAATTTACCACTCATATAACATATATATCACTGACAGATCATAAGACAGACACATTTATCTTA
CATAGGACCTTAACCTTAGCACTAACATCACAGTAACTTAGTTCATGACTCACCTAACATCCTCTACCACAAAACGCACACAGACCAAACGCACACCAAA
CCTTTCATTATTGCAACCATAACACCTAACCTCAATCACCCTCAGGTCGTTCACTAGCAGTAGCATATCACCTAAACCAACAACTAATTCACTCGCTAAT
TTACCCCCAACTGCTGAATCCAAACACCACCTAGAAGAACAAGTAACCACCACCCCTTAATCCACCAACCAACCAGCCTAGTTATTTCTACAACCTAAAG
ACATCAGCTTTCCAGAGAAGAAGTGAACCGAAGTGAACCAAATCCAACCACCGGATGCTCGTTCCCCAACCCTTCCTCTGAAAAAATACCGGAAAAGGTT
GGCCGGAGCGGCAGCCGGGAGATACTGATCCGGAGATGCTTTTTCCATCGGATCCAACCGCCCATCAGGCGCTAACCATCCATAGATCCATCCATCCCGT
AGGTCATACGGGAGCCACCGGAGACCAAGAGGTAGAAGAGACGAGGCAGGAAGGCGACGACTTCAGAGGAGCGGACACTGGTCCGGCTGTGGCCTGTAGG
GGCCGTGTGGGGGGCGAGCTGTGAGCCCACCGGTGTCAGGCGAGCTCGCCGATGCGGAGGAGGCAGCGGAGGCCGCGGGTGGCCTCGGACTCCGCGCGCC
GGAGGAAGAAGGCCGGCATGGGGAGGGAGCTCGGCTCGGGCGCCGCGGCGGAGAACGCCGGGCCCGCGTAGACGGCCGCGTTCGCGGACGCCGAAGACAC
GATCTTCTTCGTCGGCGACACGGCGGGCGCCTTGGGTCCGATCCGGCCAGTGGAGGCGAGGACGCGTGGTTCCGCCGCCGCAGGAGCGGGTTTCGCCACT
GGCGCTGCTACAACCGGCGCTGGGGCTGGGGCGGGAGCCGGTGGCTCCTCGCCACGCTTGAGGATCCGGACCTCCTCCATCACAAGCCGCTGCTTGGGCT
TCTCCTTCGTCGGGGACGGCTGCTGCTTCCGCGCAGCCGGCCTCGCCGGCGGCGACCGGCGACCAGCCGCCGCTCCCTTAACGGGTGTTGACGCCGCCGC
CTTAGGCGCTGGCGAGAAAACCGCCGCCGCCTTTGGAGGGGACGAGGCAACCGCCGCCGCCTTGGGAGGCGGAGAGGACGCGCCCGCCGGCTTTGGGCTC
CGGCGCCGGCGGGGCTTGGTTGGGGACGGGACGAACGCGTCCAGATGCATCCGGTTGTTGAGCGCGTCGTGGGATCTGAGCACCGCCGTCGCCATGGCCG
CGGAACCAGAAGACCCGAGCAAGATTCGATTGGAGAAGAGAACAAAGGAGTCTTCGAGACAAAGAAAAGAGGGACGCGAAGGCGGCGAGGCTACCGCCGC
AAGGGGAAGGGGGGCTAACCCTAGGAAGAAGATGGGGAGGGAGAGAGAGCAATGCGAGGAGGAACGGGTCGCGGTGTGAGGCGGCTTATATGGAGCGGAG
ACGAAGAGGTGGGGATCAGAGAGGCGTGTGTGGCCACGACTCC