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Detailed information on CNT30495761


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XSQ9|PIP12_ORYSJ, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Digitaria exilisOryza sativa21.1710.9485.5483forward
CNT30671344Digitaria exilisSetaria viridis35.223.4395.65138forward
CNT30523825Digitaria exilisSetaria italica33.6741.7796.21132forward
CNT30640394Digitaria exilisNymphaea colorata31.3824.687.8123forward
CNT3020673Digitaria exilisCitrullus lanatus27.310.0784.11107forward
CNT30297784Digitaria exilisTriticum aestivum34.4415.4186.67135forward
CNT30221132Digitaria exilisHordeum vulgare25.5143.2995100forward
CNT30385796Digitaria exilisTriticum turgidum42.640.6394.61167forward
CNT30564991Digitaria exilisActinidia chinensis23.4722.7785.8792forward
CNT30590722Digitaria exilisMusa acuminata29.8526.5982.91117forward
CNT30437220Digitaria exilisAegilops tauschii30.6120.9893.33120forward
CNT30658043Digitaria exilisTriticum dicoccoides41.8459.8593.9164forward
CNT30461535Digitaria exilisSaccharum spontaneum47.1936.8596.22185forward
CNT30131630Digitaria exilisLolium perenne43.3763.4394.71170forward
CNT30227805Digitaria exilisAnanas comosus30.6125.2185120forward
CNT30680472Digitaria exilisTriticum urartu30.6117.2295120forward
CNT30595794Digitaria exilisOryza meridionalis14.5426.0398.2557forward
CNT30706529Digitaria exilisPrunus avium29.347.4883.48115forward
CNT30148622Digitaria exilisBrachypodium distachyon12.520.0891.8449forward
CNT30116468Digitaria exilisOryza nivara32.9118.1794.57129forward
CNT30603734Digitaria exilisOryza punctata28.068.3883.64110forward
CNT30112244Digitaria exilisFicus carica27.316.2183.18107forward

Expression of CNT30495761

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MGCLSENLLAPRRTSSSFPSIFLVSSLSLRLRAWPRWFLEAAAVWVSVCGGVARGIIKAGRVQGAWELDRH*

>peptide 2 (85 aa)
GDAGGAVDEREDHPSEGPGLELPGLEQRRRRGLLVVLVIGALRRRADGLPLRELVGAQAHILLLPLHLPRLLSLSSLASLASVVS*

Sequence

>CNT30495761
CCGGAGATGCCGGCGGTGCAGTAGACGAGCGCGAAGATCATCCCTCCGAAGGACCAGGACTTGAGCTCCCCGGGCTCGAACAGCGGCGCCGGCGGGGGCT
CCTTGTAGTCCTTGTCATCGGTGCCCTGCGCCGCCGTGCCGATGGGCTGCCTCTCCGAGAACTTGTTGGCGCCCAGGCGCACATCCTCCTCCTTCCCCTC
CATCTTCCTCGTCTCCTCTCTCTCTCTTCGCTTGCGAGCTTGGCCTCGGTGGTTTCTTGAAGCAGCAGCGGTGTGGGTGTCTGTGTGCGGTGGTGTGGCA
CGGGGGATTATAAAGGCAGGCAGGGTGCAGGGAGCATGGGAGCTCGACAGGCACTGAGGATGAGAGTGAGTGAGGAAGACACTGTTTTTTTT