Detailed information on CNT30495244


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021511Olea europaeaCitrullus lanatus36.0534.5386.09115reverse complement
CNT30304750Olea europaeaTriticum aestivum18.528.6486.4459reverse complement
CNT30715826Olea europaeaMalus domestica golden27.5911.385.2388forward

Expression of CNT30495244

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LEKWTPFFYFISLDLERICRYFRLNLLVPRFSIGINCYSLPLQRNLSSKSQDKSHFHYLSLITDQDEFISI*

>peptide 2 (29 aa)
IGKVDPLFLFHFFGPRKNLSIFPIKSSCS*

Sequence

>CNT30495244
AATTGGAAAAGTGGACCCCCTTTTTTTATTTCATTTCTTTGGACCTCGAAAGAATTTGTCGATATTTCCGATTAAATCTTCTTGTTCCTAGATTTTCTAT
AGGAATAAATTGTTATTCCCTTCCTCTACAGAGAAACCTTTCTTCCAAGTCACAAGATAAGAGCCATTTCCATTATCTTTCTTTGATTACAGATCAAGAT
GAATTTATATCTATCTAAGTATATTTAGATAGATATTTGTCAGATCGTAGCTTCATGTACCAAACATTTCTATATCGCTGCATTCAATAGTTTTGTTCTG
ACGGTGTGATGGAGAATGG