CANTATAdb - search

Detailed information on CNT30494210

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30730518	Olea europaea	Corchorus capsularis	8.64	21.4	83.41	211	reverse complement
CNT30383861	Olea europaea	Triticum turgidum	8.48	34.33	80.68	207	forward
CNT30511569	Olea europaea	Solanum lycopersicum	4.18	41.46	84.31	102	forward
CNT30215429	Olea europaea	Helianthus annuus	8.64	29.97	83.41	211	reverse complement
CNT30354697	Olea europaea	Lactuca sativa	8.23	28.47	82.09	201	reverse complement
CNT30410880	Olea europaea	Papaver somniferum	8.64	23.29	82.46	211	reverse complement
CNT30642274	Olea europaea	Cannabis sativa	8.64	25.83	81.04	211	forward
CNT30604015	Olea europaea	Oryza punctata	4.38	22.15	84.11	107	forward

Expression of CNT30494210

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGLEVKLPFTFALEGHWSVILIMIFLLLKEKILSFWAGCA*

>peptide 2 (54 aa)
MIKKELQIVCGNIVFYKTFKLPRWWQSQNVEIDFFPMLPIVRILNNHNHIYTSK*

Sequence

>CNT30494210
GGCGTAACACTTAGCTAGCAAAGCACAATAATTCCAATATCAATTCCACGAGTGACGCTTTCTACTCAGTTATCTCCGCCATCAGCCGTCCGCCTCTCTT
ATTTCCTCCGTTCGTAAAATGCAGATCAGGCTTTTCATTTTTTGGATTATGATTTTAATTATTTTTTAGCTTTCAAAAGTTAAATTAAGAAAATCTGATT
GATTTTTCTTTTCTTTTCTTTTCTTTTCCTTTCCTTTCCTTTCTTTTTGTTTCAAATTAGGGGTTGCCGGTGTGGAGCTGGATTGAGATAATCGATGAAT
CGGAAATTTACACCTTGAACCAAACTGCTTGGCTTATTAGGTTTGAGTATATATTCTCTCTCCTTTTGCTTTTTGTTTGTCAATCTGGCAAAGTAGCCTG
AATAAGTTTACATTTATCAAGTTTTTGAACAAACTGACAAAATTTTATATTGGAAAGAGGGCAGATAGTTGTCTTGTGGGGATATAGTTTTTTTTCCAAC
GAATTGATAATTGTCTTGTGGAAATATAGTTTGTACCAAGCCTTTAAATTGCCTAGCTGATGCTAATAGCAGAATCATGGAAATGGAAATTTTTTTCCCT
TGACCAGAGTTAGAATACTGAACAATCAGGATAACATATATGCAACTAAATAGTTTTTCTTTCTTTTTCTTTTTATTTTATTTAATTTTTTTTGCCTGAT
CCTATAAGAAGAAGATTGCATGGGGGAATAACTTGAATACTTAGAATTCCGAAGTATGGCCATGGAATGACAACCATTTCTATTTACAAGCCCAACCTTT
GGAACATAATACAGGTGGTGAAGAGCCGACATTGAGGCGCCAACCTTCCCATCAATGTGAGATTTGGGAAAGATTATCTTGTTATCTTTAGACTAACTTT
TATCCGTTGAGCGACGCCCTTTTTCCTCAGCATGGTCGGATCACTGAGGCTGTCTTTCATCCTTGCTTGACAATGGGTCTTGAAGTCAAGCTTCCTTTTA
CCTTTGCACTCGAGGGCCATTGGTCCGTTATCCTGATCATGATTTTCTTACTCCTAAAGGAAAAGATACTTTCCTTTTGGGCCGGTTGTGCGTGAAGAGG
GATTCAAACCCTCGACACCGTACACGCTCTTTGACAAAAATAGTCAAATCGGAGGAAAGCAACAACACTGTGTTTACCTCATTTTCGCCCCTACAGAGAA
TCCAAACATTGACGCAAGTCCTCAGCAAAATCGAGGAACGACTGTCTAGCTGATGGGTAAGTAACGCGTAAGACCTTGCCATTGGGAGGGAAATAACAGC
TCGAAACAACTGCTAGTACCTTGAAAACAACTCTCCTTTTTACCTTATAGCTAGCTACACAATTCCTTATATTAAAGGTCCATTTGATTTGTAATTTCAT
TTGCAGAAGATTCTATACAATCAAATCTTTTAACACCACATGGTTCATGTTATTCGATTTTTTGAATCATTAGTTTTTAAAGACTTGAGAAAGTGGAGAT
TTCGAATCTTCTAATACCACTCGGTTCTTGTTACTCTTATTGTTTAATTATCACATCCTTGCACCTTGTACCCTGCACTGCGTACTAGTGCTTTCATTTC
CTTCGGTTATGAACAATGAGTTCATTTTCAAAACTTCCTTTAATATGATTGGGTTCTCATAAGAATTTTACATTTATAAGGTTTTTGAACAAATTATGAT
AAAAAAAGAGTTGCAAATTGTTTGTGGAAACATAGTTTTTTACAAAACCTTCAAATTGCCTAGGTGGTGGCAATCACAAAACGTGGAAATTGATTTTTTT
CCTATGTTGCCCATTGTTAGAATATTGAACAATCATAATCATATATATACGAGTAAATAGTTTTTTTTTTTTTTGCCTAGAACTTTTTTATCAAGAAGAT
TGCATGGAGGAAAAACTTGAATACTTAGCCCTTGCTTGATCCCCATTTTGGGGGAAATAATGCATTTTGAATAGCAGATTGATGGAGAATGTGTGGTTAA
AAATTTTAAAAAATTTTTGCATTTTCATGTAATATTATTTTATTGAAGAATGTGTGATTGAAAATGAATTTTGAAAAAATGATTTTTTTGAATAATAGGA
ATAAAGCAAGGGCTTAGATCTCTTGAGTATGGTCATTGCAAGACAAATGTGGAGAATATTGAAAATTTGAAAAAACTACTCACCTCTTGGCTTTGCCTAA
CAATTAGCTCCAAAATTCTTTTGTATTAATGAAATTCTGATTTCATTTGAAAAAGATTTTATTGAGATTCTATACAATAAAATCTTTTAATATCACTCAA
TTCACATTACTAAATCATTTTAAAAGAATCAAGGATGTGGAGATAAAGATAACATTGAATTTTTGGTACATAATGATCATGAAAAATTGGACATTATAAT
TAGCAATTTGTATGACATGATTTTCCTCTTTAATTGTAATG