Detailed information on CNT30493658


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730546Olea europaeaCorchorus capsularis15.3922.1793.89131forward
CNT30646085Olea europaeaCannabis sativa13.8727.0695.76118reverse complement

Expression of CNT30493658

Peptides detected in this lncRNA

>peptide 1 (90 aa)
KISKLLNLKISKLPGLPSLLIVGATTSTMSNRQRLKFSKLIVRVCSMAGRNGCVCYSCRKLGHSLSECSRKKRCLKCGEGFVKWMEVEKK*

>peptide 2 (70 aa)
MFEKEKMPEMWRGLCEVDGGGKKIVKTKDDCSIAVLVTVGISSGLMFRRMIMRQCITKVNQVALLRDHIS*

>peptide 3 (38 aa)
ENFQAFESENFQTAGAAVSTNRWCYDLNYVKPPASKIF*

>peptide 4 (40 aa)
MDLSSVFQKCVNVADENDQLEISLNITLRKGKRGNRDMGT*

Sequence

>CNT30493658
GAAAATTTCCAAGCTTTTGAATCTGAAAATTTCCAAACTGCCGGGGCTGCCGTCTCTACTAATCGTTGGTGCTACGACCTCAACTATGTCAAACCGCCAG
CGTCTAAAATTTTCTAAATTAATTGTACGAGTTTGCTCCATGGCAGGAAGGAACGGATGTGTATGCTATAGCTGCAGAAAGCTGGGTCATTCGTTGTCGG
AATGTTCGAGAAAGAAAAGATGCCTGAAATGTGGCGAGGGCTTTGTGAAGTGGATGGAGGTGGAAAAAAAATAGTAAAAACAAAGGACGACTGTTCCATT
GCTGTACTCGTGACTGTAGGCATTTCAAGTGGTCTGATGTTTCGCCGTATGATAATGAGGCAGTGCATTACGAAGGTGAATCAAGTGGCTCTCCTTCGGG
ATCATATAAGTTGAACGATCCAACTATGGACCTGTCAAGTGTGTTCCAAAAATGCGTTAATGTAGCCGATGAAAATGACCAATTGGAGATTTCTCTCAAC
ATAACTCTTCGCAAAGGGAAACGGGGAAACCGCGACATGGGGACGTAAAAAAGGGGATCCTATCAACCTGTTCCGACCTAGGATAATAAGCTCATGAGCT
TGGTCTTACTTCAACATCGAGAAACGAAAGAAGACTTCCATCTCCAAGTTTTCATGGCTCGATAGATAATTTGATAAGCCAATGATTTTTTTCCCTGTTT
CAAAATACGGTTAACCAACATGTTAACTAATTGATTACGATAAATTGGATCGAATTTTGTTGTTTTTTCTTCTACAGTATCCATCTGGGTCTGATAGATT
CTATCTTTCTCTTTCTTCAATGGAAGGTAAGAGTTAATTTTATTGTAGAGC