Detailed information on CNT30493203


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8L778|CESA5_ARATH, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671696Olea europaeaSetaria viridis14.6522.1891.2357forward
CNT30639474Olea europaeaNymphaea colorata21.5913.3886.984forward
CNT30629098Olea europaeaVigna unguiculata35.2235.7782.48137forward
CNT30287901Olea europaeaTriticum aestivum21.3431.3285.5483forward
CNT30393905Olea europaeaTriticum turgidum22.1126.4686.0586forward
CNT30216Olea europaeaZea mays16.9721.4387.8866forward
CNT30689838Olea europaeaTriticum urartu21.3427.8585.5483forward
CNT30706792Olea europaeaPrunus avium33.4210.4186.92130forward

Expression of CNT30493203

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MRGNTSNDPELLIPPPVFDSNTAPLHLKNTGRSNGDEERNKYDACIITYL*

>peptide 2 (39 aa)
MTQNCSFLHQSSIPTPPHCISRIPVAAMEMKREINTMLA*

Sequence

>CNT30493203
GGTAACGGTAAAGTTTGTGTTCACTCCTGCTAAAATCTTCAGCAATCCTTGAAAGAGAGCAAAAAGATGCGCGGAAACACCTCCAATGACCCAGAACTGC
TCATTCCTCCACCAGTCTTCGATTCCAACACCGCCCCATTGCATCTCAAGAATACCGGTCGCAGCAATGGAGATGAAGAGAGAAATAAATACGATGCTTG
CATAATTACTTATCTGTAAATTGACAATATTGTTAGCTAAAGCCTCCGGAAACAAAATCCAAGAACAATAAATTTCCCAGTAAGAAGGCAGATGGCAGGC
AATGTACAGTACACAATCAAAGGGATAGAAGTCCAGGGATATACAACTGAGTTTATATAAGAAATTCTTTCCAACCACTTCAATCCACC