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Detailed information on CNT30492881


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690834Olea europaeaOryza sativa39.3828.3586.22254reverse complement
CNT30677945Olea europaeaSetaria viridis36.7415.6486.5237forward
CNT3021516Olea europaeaCitrullus lanatus51.1617.9490330forward
CNT30730496Olea europaeaCorchorus capsularis44.9626.6894.14290reverse complement
CNT30524944Olea europaeaPhaseolus vulgaris32.2520.8886.06208forward
CNT30198768Olea europaeaPisum sativum26.234.1484.62169reverse complement
CNT30502643Olea europaeaNicotiana attenuata74.7337.2286.72482forward
CNT30710142Olea europaeaGlycine max17.9826.0186.21116forward
CNT30163195Olea europaeaPistacia vera35.8199.1485.71231reverse complement
CNT30191576Olea europaeaSecale cereale30.2349.7486.15195reverse complement
CNT30297822Olea europaeaTriticum aestivum32.450.7386.12209reverse complement
CNT3083498Olea europaeaVigna radiata13.3337.0789.5386reverse complement
CNT30543269Olea europaeaBrassica napus40.318.7891.15260forward
CNT30237740Olea europaeaBrassica oleracea40.3121.6891.15260reverse complement
CNT3077654Olea europaeaBrassica juncea40.3157.7891.15260forward
CNT3018194Olea europaeaZea mays32.5635.8486.19210forward
CNT30610163Olea europaeaGossypium raimondii43.8853.288.69283forward
CNT30684722Olea europaeaTriticum urartu42.6425.7787.27275forward
CNT30364733Olea europaeaSorghum bicolor34.2690.5783.26221forward
CNT30355468Olea europaeaLactuca sativa45.1223.7990.03291forward
CNT30416238Olea europaeaPapaver somniferum24.0320.2394.19155forward
CNT30644293Olea europaeaCannabis sativa14.4228.9790.3293forward
CNT3056176Olea europaeaAmborella trichopoda27.63.8384.27178forward
CNT30319059Olea europaeaAsparagus officinalis51.0140.4787.54329forward
CNT30151250Olea europaeaBrachypodium distachyon25.8927.0786.23167forward
CNT30101183Olea europaeaOryza rufipogon23.2625.4287.33150forward
CNT30604848Olea europaeaOryza punctata41.2481.3583.46266reverse complement
CNT30550344Olea europaeaOryza brachyantha11.4731.4987.8474reverse complement
CNT30723626Olea europaeaLupinus angustifolius18.9121.0392.62122reverse complement

Expression of CNT30492881

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MQIQSRSYNKNKRSFSINPFAPHSSRIRKILFKFEFVHLESGFF*

Sequence

>CNT30492881
CCGCGTTCGAGAATCCCCTCCCTTCTTCCACTCTGTCCCGAAGAGTAACTAGGACAATTTAGTCACGTTTTCATGTTCCAATTGAACACTTTCCATTTTT
GATTATTTTCAAAGGAGAAGATTATTCTCTTTACCAAACATATGCAGATCCAATCACGATCCTATAATAAGAACAAGAGATCTTTCTCGATCAATCCCTT
TGCCCCTCATTCTTCGAGAATCAGAAAAATCCTTTTCAAATTTGAATTTGTTCATTTGGAATCTGGGTTCTTCTAATTCATTTTTATTTAATATTTTTCC
CTCTCTTTTTTTATATCACTTCTTAAGTCCCATAGGTTTGATCATGTAGAATTTGACCCATTTTCTCATTGAACGAAGGGTACGAAATCAATCTGATTGA
TTTTTCGATCAAAAGTACTATGTGAAATCTTCGGTTTTTTCCTCTTCATCTATCCCTATCCCATAGGTACAGTGTTTGAATCAATAGAGAACCTTTTCTT
CTGTATGAATAGATCTTATTCCATTCCAATTCCTTCCCGATACCTCCCAAGGAAAATATCGAATGGATCCCAAATTGATGGATTAGTGTGAGCTTATCTA
TGCGATATGCACTTTTCGAATAGGAATTCATTTTCTGAAAGATCC