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Detailed information on CNT30491951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678225Olea europaeaSetaria viridis9.7723.0889.3375reverse complement
CNT30284510Olea europaeaTriticum aestivum11.8536.1187.9191forward
CNT30657980Olea europaeaTriticum dicoccoides11.8522.387.9191forward

Expression of CNT30491951

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPPNPSSQFVFIQSSWSELEDFLFMSYFNVSIVSY*

>peptide 2 (39 aa)
MGLLKFLFIWSQALSWCCEVYASKSVLTICIYPKLVVRA*

>peptide 3 (84 aa)
VIPSFLLVSRVERKNLRVSFPQPFSPLHVRLWFLQSPGFRDVVVERKKSRVSFAQQLSLAPKNLSFPPVDTSPSHLHGLQVKEV*

Sequence

>CNT30491951
AGGTAATACCATCTTTTCTTTTGGTTTCTAGAGTAGAGAGAAAAAATTTGAGGGTTTCCTTCCCGCAGCCGTTCTCGCCGTTACATGTACGCCTCTGGTT
CCTCCAATCGCCCGGTTTCAGAGACGTTGTAGTGGAGAGAAAGAAATCAAGGGTTTCATTCGCGCAGCAGCTGTCATTGGCCCCGAAGAACTTGTCTTTC
CCACCCGTCGACACCTCGCCGTCACACCTACACGGGCTTCAGGTTAAAGAGGTTTGATAATGAAAGCAACCCTTGGAACATACTACAGCCTCTAGGTGGT
GAAGAGCTGACATCGAGGTGCCAAACCTTCGCGTCGATGTGAGCTCTTGAGGAAGATATTTGCAAGATGGAAGACCTTTTGTTATGGTTTTCAACCCATT
AGGAGTACCTTCACGAATGAATGTAGGGATAGGTTCATTCCCATAATATTTTGAATGAAGGTAAAAAAAAAATGGTCTCACATGGATCTTTACAAATTGG
GTCTATGAGAAAATAGTTTTGTACTGTTGTAGTAGGCGATTGGCTATTCTCAAATGGGTCTATTAAAATTTTTGTTTATTTGGTCACAAGCCTTGAGTTG
GTGCTGCGAGGTGTATGCCTCCAAATCCGTCCTCACAATTTGTATTTATCCAAAGCTCGTGGTCAGAGCTTGAAGATTTCCTATTTATGAGTTACTTCAA
TGTGTCTATAGTGTCTTATTGACTCATTTTCCCGGTGTTCAATCTTGAAACCTACATGTGGTTGTCCA