Detailed information on CNT30491922


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200101Olea europaeaPisum sativum46.98.888.24136forward
CNT3090302Olea europaeaSolanum tuberosum58.6226.8691.18170forward
CNT30283847Olea europaeaTriticum aestivum51.0310.8387.16148forward
CNT3068316Olea europaeaLeersia perrieri51.0325.5685.14148forward
CNT30203008Olea europaeaHelianthus annuus28.287.4587.882forward
CNT30715684Olea europaeaMalus domestica golden29.319.8589.4185forward
CNT30414626Olea europaeaPapaver somniferum60.694088.64176forward
CNT3054326Olea europaeaAmborella trichopoda50.6910.0588.44147reverse complement
CNT30110673Olea europaeaOryza longistaminata46.5549.8288.15135forward
CNT3021701Olea europaeaPopulus trichocarpa63.7914.183.24185forward
CNT3039143Olea europaeaCucumis melo56.5514.7590.24164forward
CNT30174665Olea europaeaVigna angularis4010.6385.34116forward

Expression of CNT30491922

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MENTSLSKINRHYITLLHWKSYTMTILWTPRVLK*

>peptide 2 (49 aa)
IHTEPLNLPNQKPELYALYERKATDWDHSIQRCEHDTKVNPWKIPLYQR*

Sequence

>CNT30491922
TAATCCATACAGAGCCATTGAACCTGCCCAACCAGAAACCAGAGCTGTATGCATTATATGAACGAAAAGCAACCGACTGGGATCATTCAATACAACGGTG
TGAACACGATACCAAGGTAAACCCATGGAAAATACCTCTTTATCAAAGATAAATAGACACTACATAACTTTGTTGCATTGGAAAAGCTATACTATGACTA
TTCTATGGACTCCTCGTGTTCTAAAATAATCCACTGAACAAGGGTTACTATTTGTTCTATTCTATTGGTAATAATGAAACAACTCCATTC