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Detailed information on CNT30491885


BLAST search results

BLAST vs Swiss-Prot:
sp|D7SFH9|LRL26_ARATH, E-value = 5e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379990Olea europaeaManihot esculenta7.4426.7387.96108forward
CNT3048051Olea europaeaPrunus dulcis13.3637.8978.87194forward

Expression of CNT30491885

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MQRLEIRHRIPQSSNCRGLHPKSSYLYTNYLEINIICFSSRKKENLKSDFCKGLIYLLHTSTYHQALSLFLQPKTVSP*

>peptide 2 (39 aa)
MLPTSFMKSSPLPFTSFKTLTATNRPLGSIPLYTLPYPP*

Sequence

>CNT30491885
CGGATTTATAAGACATTCCTCCAAAATTTCTACAGAAAACTTCTGGGGCAATGTAACCAATAGTGCCCCTTGTACCAACTGTTGACAAAATACTCTGCTT
CTTTCCGCATAATTTAGCAAGGCCAAAATCTGAAATTTTTGGACAGAAGTCTTCATCTAAAAGAATGTTCTGGGGTTTAATGTCAAAATGTATAATTCTT
GTATTGCAACCTCCATGAAGATACTCTAAACCTTGTGCGACCCCAAGAGCAATCTGGTACAGTGTTTTCCACTCTAAATGGCCTTCTGAATTGGGTGATC
CACTCTTGTACATTAGTTTGTCTAATGATTTATTGGGCATAAATTCATAAACTAATGCTCTTCTATTTCTCTCATAACAAAATCCTAAGAGATTGACAAT
ATTGACATGAGAAGTTCTACTGATGCTACCAACTTCATTCATGAAGTCTTCTCCACTTCCTTTTACCTCATTTAAAACCTTGACAGCAACGAATCGACCA
TTAGGTAGCATTCCTTTGTACACACTACCGTATCCTCCTTGACCAAGCTTATCAGAGAAGGATTTGGTTATATTTTTAATTTCCGAGTATTTATATCGTT
TCGGCGCAAGAGATTCGTGGTTTAGCAAAAATGTTTCCACTATTCGATTGTTTTCCTGGATCGACTCCCATGATGAACATCGTCGTTTAAGGTAGCAGAA
TATAATGATGGATGATGTAATGATACTAGGTATGCCGAGTGACACCCCTGCATGCAAAGACTGGAGATAAGACACAGAATTCCGCAATCGAGCAATTGTA
GAGGGCTTCATCCCAAAAGTAGTTACTTATATACAAATTATTTGGAGATAAATATAATATGTTTCTCATCAAGAAAGAAGGAGAACTTGAAATCTGACTT
CTGCAAAGGTTTGATTTACCTATTACATACTTCCACTTATCATCAAGCCCTTTCTTTGTTCCTGCAACCAAAAACAGTAAGCCCATAAAACTTGAACAAA
TCTCCTCACCACTCGCATGCTAGTACATCCACACGCGGGCATGAAAGTGAAATCTTTCTTAAGAATTCTTTCATGAAAGTCAACTTCAGTTCAACAATAA
TCTACTGGTAGCTTAAGCATTAGTTGGCTCAATAAGAATCTGAAACTGTTTAAAACAAGAAGCTGCTATTCTTACGTTGATTTGAGATGGAGAGGCAGGA
AAAAGAATTGTTCCTTGGCACAAGAAGGATGGGGGTGTTAACCACTGTTATGACGTTGAAGAATTGAGTGTATTTCGAGTCCATATGTTAGAATAAACAA
CTCAGACGTCTTATAAAGTTAAACGTGTGTTTGTTAATAAAGCCGGGGACATGAATTAGTGATATTCCATGGATATCTAATGTTAATGCTTTGGATGCAG
CCATTAACACTAAAAAATTTTCCCCTAAAAACAGAGAATTGGACAATCGAAG