Detailed information on CNT3049179


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 7e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406680Cucumis sativusBeta vulgaris21.4910.9888.8972forward
CNT3037313Cucumis sativusCucumis melo31.0423.5899.04104forward

Expression of CNT3049179

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MIGRVRLKSKRAAFSISSAREGGAKERDVEREMDWGFLRNCGIRVRVLGMENLGVLLEMERGGEGGLEEAMITFAMAE*

>peptide 2 (48 aa)
EELSHHDRESEVEVEESGLFDLFSEGRGSEGERCGEGDGLGLFEELWD*

Sequence

>CNT3049179
GAGGAATTGAGCCATCATGATAGGGAGAGTGAGGTTGAAGTCGAAGAGAGCGGCCTTTTCGATCTCTTCAGCGAGGGAAGGGGGAGCGAAGGAGAGAGAT
GTGGAGAGGGAGATGGATTGGGGCTTTTTGAGGAATTGTGGGATTAGGGTTAGGGTTTTGGGGATGGAGAATTTGGGGGTTTTGTTGGAGATGGAAAGGG
GAGGAGAGGGGGGTTTGGAAGAGGCCATGATAACGTTCGCCATGGCTGAGTAGAAATGAAGGTTACAGAGGTCTGAGAGAGATAACAATGGCGGATTGAG
AAAAGAAATGGGGTGGAGATTGGAAAGGGAATTGG