« Back to Olea europaea search


Detailed information on CNT30490426


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 1e-142

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525116Olea europaeaPhaseolus vulgaris47.8536.6484.07546forward

Expression of CNT30490426

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSSVMVFPVRVLTKICIPPLNLSTKWRVLSFWML*

>peptide 2 (29 aa)
MFGRPQAVYQRRSASVGLGGCPPYPGSWP*

Sequence

>CNT30490426
TTGCAGAAAAAATAAACAAGAATATTTATCAGCAAGTCCTTAGTTATGTTACTACTAACTAAAACATTTCAATAAATACATAATAAGAAATACATAAAAG
ACTTCACTTTATTCATGAATTGGATTTCCCATCAAACTTAAATTGTAGAGAGACTGAGCAAAGCGACACTTCAAACCAAAGAGAAAATAAACCATTCAAA
AATGGCTACTTGAAACCAAACACAGGTCCACAGAGAAAACGATCGAACACAAAAAAAAGAAACATCACAATCAACGGACAGACACCATCATAGAACGACC
AAAAGAACAGCAACTTCACAGGCCACCACGGAGTCGGAGGACAAGGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTCCTCCCATCCTCC
AGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGAATTTTTGCTTTCACGTTGTCAATTGTATCTGAGCTTTCCA
CCTCCAAAGTGATGGTTTTCCCGGTTAGAGTCTTAACAAAAATCTGCATACCTCCCCTCAACCTCAGCACCAAGTGCAGAGTTGACTCCTTTTGAATATT
ATAATCTGCCAATGTTCGGCCGTCCTCAAGCTGTTTACCAGCGAAGATCAGCCTCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG
ACATTATCAATGGTGTCGGAGCTTTCCACCTCAAGCGTAATGGTTTTCCCGGTCAGGGTCTTGACGAAAATCTGCATTCCACCCCTCAACCTGAGCACCA
AGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGTCTTTGTTGGTCTGGGTCTTG
ACGAAAATCTGCATTCCACCCCTCAGCCTGAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCTAGGGTACGGCCATCCTCAAGCTGCT
TACCAGCGAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTATCCTGAATCTTAGCCTTTACATTATCGATGGTGTCGGAGCTTTCCACCTCGAG
GGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAGATCTGCA