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Detailed information on CNT30490421


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 5e-117

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546134Olea europaeaIpomoea triloba41.0782.183.76665forward
CNT30701458Olea europaeaQuercus lobata42.1969.7781.99683forward
CNT30500348Olea europaeaCoffea canephora41.4544.5883.16671forward
CNT30525259Olea europaeaPhaseolus vulgaris38.0536.6483.28616forward
CNT30599356Olea europaeaFraxinus excelsior19.3999.0590.76314forward
CNT30624534Olea europaeaDaucus carota40.8937.1983.69662forward
CNT3032157Olea europaeaTheobroma cacao42.3175.2782.92685forward

Expression of CNT30490421

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MFGRPQAVYQRRSASVGLGGCPPYPGSWP*

>peptide 2 (55 aa)
MVSELSTSRVMVLPVRVLTKICICRIEQNKFRNKSFRSSLIRDEINSINQKTMVI*

Sequence

>CNT30490421
ACTAACTAAAACATTTCAATAAATACATAATAAGAAATACATAAAAGACTTCACTTTATTCATGAATTGGATTTCCCATCAAACTTAAATTGTAGAGAGA
CTGAGCAAAGCGACACTTCAAACCAAAGAGAAAATAAACCATTCAAAAATGGCTACTTGAAACCAAACACAGGTCCACAGAGAAAACGATCGAACACAAA
AAAAAGAAACATCACAATCAACGGACAGACACCATCATAGAACGACCAAAAGAACAGCAACTTCACAGGCCACCACGGAGTCGGAGGACAAGGTGAAGGG
TAGACTCCTTTTGGATGTTGTAGTCAGCAAGAGTCCTCCCATCCTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGGATACCTTCCTT
GTCCTGAATTTTTGCTTTCACGTTGTCAATTGTATCTGAGCTTTCCACCTCCAAAGTGATGGTTTTCCCGGTTAGAGTCTTAACAAAAATCTGCATACCT
CCCCTCAACCTCAGCACCAAGTGCAGAGTTGACTCCTTTTGAATATTATAATCTGCCAATGTTCGGCCGTCCTCAAGCTGTTTACCAGCGAAGATCAGCC
TCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCCACCTCAAGCGTAATGGTTTTCCCGTA
AGGGTCTTGACGAAAATCTGCATTCCACCCCTCAGCCTGAGGACCAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCTAGGGTACGGCCATCCT
CAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGATCTGGAGGGATCCCTTCCTTATCCTGAATCTTAGCCTTTACATTATCGATGGTGTCGGAGCTTTC
CACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTAACGAAGATCTGCATCTGCAGGATTGAACAAAATAAATTTAGAAACAAGTCATTTCGTTCATCA
CTCATCAGAGACGAAATAAATTCAATTAACCAAAAAACTATGGTTATATAACCCATTCAAAACCTAGTTATTCTCATAAATATATCCGGAAACAATTAAC
AAAATACAGAAAGAATAAACAAATTTCTGGAGAAATTATTCAATGAATTAGCAAACATAATAAAATTCGTCAAAAGATATATACTGAAAACCTATCATAA
AAACAGATGTGCAGGATCCGCACAAAAATAATCACAGATCGGGAAAAAATTTGCAAAATCTAAAAATCAAAGGCAAAGTAGATGGATAATCTTCAGATCG
GCAGGGTCATTCCGGAAAATCGATTTTTACAATCAATTAATGCTTAATAAAAAAATCAAATCCAATAATCAAATGTTAATTTTGCCCCCATAAAATATAG
ATCTGCAGTATCCTTTCAAAAATTGATTACTTTACAATCGCAGATCCAAAAAATCAAAATCAACAAATCAAACTATTGAAAGACTGAGATCTATAGCCTA
TCAGACAAAATCAACTTAGACAAATATTAAACAAAGTACCTTGAATAAGAGATTGAACGAGAGAAAAAGATTCGAATAAAACTTTGACGAGAATCGATGA
AACGAATTAGAGATGTTTT