Detailed information on CNT3049017


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 3e-79

BLAST vs NONCODE:
NONMTRT001761, E-value = 3e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516757Cucumis sativusJuglans regia16.7233.1382.93164forward
CNT30698134Cucumis sativusQuercus lobata29.4615.578.89289forward
CNT3021623Cucumis sativusCitrullus lanatus43.1231.1593.14423forward
CNT30730016Cucumis sativusCorchorus capsularis2131.1282.52206forward
CNT30629841Cucumis sativusVigna unguiculata16.1127.0182.28158forward
CNT30507460Cucumis sativusNicotiana attenuata20.967.6680.49205forward
CNT30710011Cucumis sativusGlycine max2147.6980.58206forward
CNT3042792Cucumis sativusPrunus dulcis11.4230.3585.71112forward
CNT3094368Cucumis sativusSolanum tuberosum22.6385.7181.98222forward
CNT30564216Cucumis sativusActinidia chinensis7.0330.9486.9669forward
CNT3084712Cucumis sativusVigna radiata15.0952.380.41148forward
CNT30610860Cucumis sativusGossypium raimondii8.1527.1288.7580forward
CNT30129085Cucumis sativusCorymbia citriodora34.6632.2978.24340forward
CNT30154501Cucumis sativusPrunus persica16.2150.9683.65159forward
CNT30644515Cucumis sativusCannabis sativa22.8338.7579.02224forward
CNT3031830Cucumis sativusTheobroma cacao35.8896.4478.98352forward
CNT3037832Cucumis sativusCucumis melo46.7954.5196.73459forward
CNT30726871Cucumis sativusLupinus angustifolius23.0412.5980.97226forward

Expression of CNT3049017

Peptides detected in this lncRNA

>peptide 1 (49 aa)
KKYHRIVDILLLPVFNAVAQKLLFVKKQMEVEYIHNSSKKEIDMQSQRI*

>peptide 2 (73 aa)
MASSIWVSSIMEGMRRRGEAERPLGEIKALVLDEAKLELSWLAMGEVAVAMAAAFASAAFGLWKDQWQRRRLR*

>peptide 3 (80 aa)
MIQNLLDVVREIPPKKNPPENFAHPSAVWRGSGVFFRPVKVNDGAVDGSPSLNDATPYIVKQTLKMTMRPPAASEPAPPA*

Sequence

>CNT3049017
GAAAAAAGTACCATCGTATTGTTGATATTCTCCTCCTACCAGTTTTTAATGCAGTGGCACAGAAGCTATTGTTTGTGAAGAAGCAAATGGAAGTAGAGTA
CATACATAACAGTTCCAAAAAGGAAATCGATATGCAATCACAAAGGATCTAACAAAGAGGTTTGGCAGAAAATATACAATTTTATGTTTCCATAATACAG
ACATGGAAGTTGCATTGTAGAAACAGAAAATGATACAAAATCTACTTGACGTAGTAAGGGAGATACCACCGAAGAAAAACCCGCCTGAGAATTTTGCCCA
CCCATCGGCTGTTTGGAGAGGATCAGGGGTCTTCTTCCGGCCAGTCAAAGTCAATGATGGTGCGGTAGATGGCTCTCCTTCATTGAATGATGCAACACCA
TACATTGTCAAGCAGACGCTCAAAATGACAATGAGACCCCCAGCAGCCAGCGAGCCTGCTCCTCCGGCGTAGGCTGTGTTCCTTAGAGGGCCAGCTTTGA
CAAATGGACCAACCAGAAAGAAACCGTGAGCCAGGCCCACTTCTATTCCCCTCAGCAATGGGCTGACTGCTGTTCTGTAGGCTGGGAGGTTTGAAAGATA
CCATGCTATCAGTGGGCTTGAGGTTACTGGAGTCTCAAGGCTTCCAATGAATGGGTCTCCATTGATCGGCTGAATCACTTGGAAAGTCGGCTGCAACAGT
TTCAATACCTCATTAACATCTTTGCATGGCTTCTTCAATTTGGGTATCCTCCATAATGGAAGGGATGCGTCGGAGGGGCGAAGCGGAGAGGCCTTTAGGA
GAGATCAAAGCTCTCGTGTTGGATGAAGCGAAGCTGGAACTGAGCTGGCTGGCAATGGGAGAGGTTGCAGTGGCCATGGCTGCTGCTTTTGCTTCTGCTG
CCTTTGGCTTGTGGAAGGATCAGTGGCAGAGAAGAAGATTGAGGTGAGATTTTTAGATTTGGTTTTGGGGGTTAGTTTAAG