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Detailed information on CNT30490117


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 6e-35

BLAST vs NONCODE:
NONTPRT002187, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671914Olea europaeaSetaria viridis27.1919.9697.29332forward
CNT30712870Olea europaeaGlycine max69.4551.0296.11848forward
CNT30605266Olea europaeaGossypium raimondii96.4856.2896.431178forward
CNT30655407Olea europaeaRosa chinensis10036.5295.821221forward
CNT3038420Olea europaeaCucumis melo76.0965.0694.29929forward
CNT30577866Olea europaeaOryza barthii20.3915.2997.19249reverse complement
CNT30725732Olea europaeaLupinus angustifolius20.6455.8897.62252forward

Expression of CNT30490117

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RMHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 2 (30 aa)
MMSMARGRALNGLGWPHFALPTPGKLRIQA*

Sequence

>CNT30490117
AGAATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATC
GGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACC
GAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGGTTTGAAGAAAAACAAACACGTCTTGTCAGAGCCTCAGCAAAGCAAAGTGTTCACTTCTTT
TTCGCCAGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGTAAGCTTTCAAGCCCCTTTACTAGAAAGTAAAGGGCGCAGTGAACTGTAA
TTGTGAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTC
TGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACC
CTATTTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTGACTTTCTATTAGATTAGTAAAGCGC
ACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTT
CTAGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAA
AATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATG
GCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAGGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGAC
TTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGAT
GACAACCAGGAGGTGGGCTTG