CANTATAdb - search

Detailed information on CNT30489969

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30196112	Olea europaea	Pisum sativum	5	21.17	89.8	98	forward
CNT30145435	Olea europaea	Medicago truncatula	4.95	26.8	90.72	97	forward
CNT30598581	Olea europaea	Fraxinus excelsior	5.81	32.29	92.98	114	forward
CNT30605440	Olea europaea	Gossypium raimondii	5.81	27.87	89.47	114	forward
CNT30360144	Olea europaea	Lactuca sativa	5.81	20.99	90.35	114	forward

Expression of CNT30489969

Peptides detected in this lncRNA

>peptide 1 (38 aa)
SVALYSKFLKFTLSLYLSFIKIIFLSNLVYSSQGKVLK*

>peptide 2 (31 aa)
MDLPSRIYSYEAYTIHSTKFPNFLLVRFYKY*

>peptide 3 (34 aa)
MLHYSYNTCLAHYLHVPKTSFYQKNCFNIVNGNF*

>peptide 4 (38 aa)
MAMACQALTGVVDATYGAGYKLDVRNGSSNTTLRGVES*

Sequence

>CNT30489969
CTCTGTAGCCCTCTATTCCAAGTTTCTTAAATTTACTCTCTCCCTCTACTTAAGCTTTATCAAAATAATATTTCTGTCCAATCTAGTATACTCTTCGCAA
GGTAAAGTCTTGAAATAATTCTCACCTCTCATTTTTAATTGGTTATTAATTTCTCTTCAGCTTCATCTTATATGCAATTTTATCCTTTTCACATGTTTAT
TTTATTGCTTTTTTCTACTAAAAGAATTTCTTCAATATTGTAAAAAATCAGTGCTTTGTTCTTGTGAGGTATTCCTTTTTCCTGTTAATAAGATATACTA
CCATTTCTTGGTGCAGTTTCTGGGGAGATCATCAAATGTTGATGAAAAATTTTGGCATTTTTAGTTAGAATTTTTTGCTGCATGTTGATTGATATTTAGG
CTTTTTTAGCATTGGTGATTTCAGCATTTGAGTCTTCGCCTATTTATCTAAGAAGAAGATAGAGCGCCATTAACTTCGCCCATAATTGAGAAAAAAAGTG
ATATCATATTCTTAGTTTAATTCCTGTTAACTTTCTGGTCACTTTACCACAGATATTTTGTCATATAGCAATAGCATCCTTAACTTTGCTCATAATTGAG
AAAATATCATTAGTTTGTTTACGCCCTCGTCACTTAATCACTCAAAGTTTGACATGTAGCAATTGCATCGTTAACTTTATTCATAATTGTGAAAATATCT
TTAATGCCCTTCTATCCTCTGGAAACTCTTGCCATTAGTTCTCACTCTTTCCCTGTACCTTCTTAAAATTACTCTCACTCTAATCAAGCTTTGTTGTGTA
TAATAATCTCTACGTGATCTCTTATACACTCTTCAAAGGTAAAGGCTTTAATTATCTGATAATAATCAGATTGCAATTGCTGTATTTTTGTGGTTTTGTG
TATATGTTTGGTCAGTTTCCCAGAGGGTGCCTCTCCCTCCCATTTTCTCACTAATTTGTGCCTGAAAAAATGGACCTACCCTCCCGTATTTATAGCTATG
AAGCCTATACAATTCATTCTACTAAATTCCCAAATTTTCTTTTAGTAAGATTTTACAAATATTAATATCATACACAAATCACTCACAATATCAATACTAT
TGAATGCTTCACTACAGTTACAACACGTGCCTTGCACATTACTTACACGTGCCTAAAACCAGTTTCTACCAAAAGAATTGCTTCAATATTGTAAATGGTA
ATTTCTGAAAGTGAATCAAGTTATCCAAGGCGACAATGTTGGTGCCTCCTTCAGTCCTACCAGTGAAGTAGGGACTTGGCCGACCTCGGAAAGATCCAAA
TCTAAAGCATGTTCAAACTGCATGTGGACCTCCTGGTTTTAGAGGAGTGAAAGGAAACCACCATCCCCATAAAGTGGATAGAGTAGAAGGGAATGGCAAT
GGCGTGCCAGGCACTGACTGGTGTTGTTGATGCCACCTATGGTGCTGGCTATAAGCTGGATGTTCGAAATGGCAGCTCCAATACTACTTTGAGGGGTGTT
GAATCTTAGGCATTTTTAGCGTTGTTGATTGCAGTATTTGAGGCTCAGCCTACTTGTCTAAGAAGAAGAAAGATAGGGATTGTTATTGTATGAAGAACAA
GAATTTGAATATTTTGTTTTATATATACTAGTCAGCTTCTTCTTTCTCAGCCTTTTCATTTGGTATCATTTTGAAGTTGCATTCTTATTTGTAAAAGAAT
GGAAGACGAATGACTATAGCTCCTATTTAATGCCAATCTTATCTCATATGGAAGTCTCACTTGCATTTATGACGATGGACCAATGAGGTGTAACCAACAA
TGATACGTGCCTCTTCAAATGAGAATATCACAGGCATAAAATTGATGAAGCTTCGATAGAAGCTAGGTCTAGGGGGAAGTTACGAGCATTACATTCATGC
ATAACTTCCATACCAAGGTTAGCACATTTAATTATATCAGCCCAATTATTAATTACATGGC