Detailed information on CNT30489557


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512995Olea europaeaJuglans regia21.6718.7689.91109reverse complement
CNT30729401Olea europaeaCorchorus capsularis21.0711.5686.79106reverse complement
CNT30381087Olea europaeaManihot esculenta35.3924.1584.83178reverse complement
CNT30561835Olea europaeaActinidia chinensis28.8316.584.14145reverse complement
CNT30600040Olea europaeaFraxinus excelsior74.9544.8387377forward
CNT30608750Olea europaeaGossypium raimondii23.0645.3185.34116reverse complement

Expression of CNT30489557

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LLSPAGSEFFSYLEKRKSFDFANLFRRLCRNLKL*

>peptide 2 (32 aa)
MADVVLCLLKAVALLTSSSSPAVVYTISFLLL*

>peptide 3 (31 aa)
SYHLQAVNSFPILRKEKVLILQTFFVVFAEI*

Sequence

>CNT30489557
CTCCTATCACCTGCAGGCAGTGAATTCTTTTCCTATCTTGAGAAAAGAAAAAGTTTTGATTTTGCAAACCTTTTTCGTCGTCTTTGCAGAAATTTGAAAC
TTTAGAATTTCTTCGAATCGATGGATTTCGAGTGAGTTCGCCGGCGATTCTGTGGTGGTTTTGAGAGGCATTTAAGGTGGGGCTAAAACCAGGGGAAGAC
AAGTTGTAGACATCACGGCTATACTCAGAGTACATCGATTTGTTATCCATATCCAGTCTGTACGATGCAAGGGTTGTGTAATTGAGAGCAACCATTTGCC
GCATGGCGGACGTGGTGCTTTGCCTTCTGAAGGCGGTAGCCCTTCTGACCTCCTCTTCCTCGCCGGCGGTGGTTTATACTATTAGCTTCCTGCTTCTGTA
AATATTTGTCGAATCATATAATTCGATTTAATTATTACTTAATTTGATAAGGATCTGTCTGCGTTTTGGGTTTGGGGTTGGTGGGTCTTCTTTGTAATTG
TTG