Detailed information on CNT3048947


BLAST search results

BLAST vs Swiss-Prot:
sp|O82709|CALX_PEA, E-value = 2e-137

BLAST vs NONCODE:
NONGMAT001818, E-value = 4e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676354Cucumis sativusSetaria viridis10.2528.7782.76145forward
CNT30517752Cucumis sativusJuglans regia14.9149.0780.09211forward
CNT30377662Cucumis sativusArabidopsis thaliana13.2920.884.04188forward
CNT30281153Cucumis sativusChenopodium quinoa16.6836.3179.66236forward
CNT30728459Cucumis sativusCorchorus capsularis26.1559.6880370forward
CNT30629049Cucumis sativusVigna unguiculata26.532.7880.27375forward
CNT3043981Cucumis sativusPrunus dulcis12.349.4381.61174forward
CNT30164689Cucumis sativusPistacia vera10.2526.3684.14145forward
CNT30397803Cucumis sativusTriticum turgidum12.5122.5580.23177forward
CNT30561418Cucumis sativusActinidia chinensis22.431.4579.18317forward
CNT30238817Cucumis sativusBrassica oleracea8.6222.8986.89122forward
CNT30144801Cucumis sativusMedicago truncatula19.5147.7580.07276forward
CNT30264134Cucumis sativusBrassica rapa13.522.0383.25191forward
CNT30126269Cucumis sativusCorymbia citriodora7.2126.9185.29102forward
CNT30686469Cucumis sativusTriticum urartu10.2525.6680145forward
CNT30120413Cucumis sativusCitrus clementina16.6829.1781.78236forward
CNT3038556Cucumis sativusCucumis melo21.5538.6196.07305forward

Expression of CNT3048947

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MKLQVSRLWRSKCCQTRYRLAWSRSQFQLQPQDRSQVFQFRSS*

>peptide 2 (32 aa)
FCETIWSTSSCFLGLLFLFLNFKLWLPFLITV*

>peptide 3 (51 aa)
MMLTVLPSLRILMLHDEVHLVRSPALVRSKHDRVRRFIIELLSFPSSILGP*

>peptide 4 (73 aa)
SARPSGPLAAASSAFCFSFSTSNFGFHFSSRYEVASFSSLAIKMLSNKIPSCMVQISIPIAATGSKSGFSISK*

Sequence

>CNT3048947
ATTCTGCGAGACCATCTGGTCCACTAGCAGCTGCTTCCTCGGCCTTCTGTTTCTCTTTCTCAACTTCAAACTTTGGCTTCCATTTCTCATCACGGTATGA
AGTTGCAAGTTTCTCGTCTTTGGCGATCAAAATGTTGTCAAACAAGATACCGTCTTGCATGGTCCAGATCTCAATTCCAATTGCAGCCACAGGATCGAAG
TCAGGTTTTTCAATTTCGAAGTAGCTAGGGTTAGGGATTTGCCTAGGCTTCCATATTCCCTTGTAGTTAGGATTGTCAATTTCTGGGGCGTGCCACTTGC
CCTTGTATTCGGGGTTTCTCTTCATTGGTTTCTTGTCATCTGGATCGGCTATTGTCTTGGCAGGAATTATAGGAGGCTCGAAATCATCCTCAGAAAGGAA
ATTAGCCTTTTTCTTCTCACTCCCATCAATGAGAATACGCACATTATTGCCAGATTCCAAAATGGCTGTGTAAACATGAGACAATTTGTCGGCTGGGACA
GAAGGAGGATTCTTTAGATGATGCTCACCGTACTCCCCAGTCTTAGGATTCTTATGCTTCACGATGAAGTGCACCTTGTTCGTAGCCCCGCACTTGTCAG
GTCCAAACATGATAGAGTAAGGAGATTCATTATCGAACTCCTTAGCTTTCCATCCAGCATCCTGGGGCCGTAGGTACTTAAGATAGGCACCACCACATTC
AAGCCCATTTTGAAGGCGAGTCTCAAACTGGAGAACCACGGTCCCGTCCTTGAGACTCGCTGGCTCATCGAGCTCACTTACAATGGCGTATTTCCTTGCC
TTCTCACTTACTAAAAGTCCGTAATCATCATGCCCCTCACTCTTAGCATGCTTCCAGACACCTATGGAACACAACAGAAAAATGAGTAACCTAAGCAACT
CTCTCTAACCAACCCACCGAGCATGACAACGTATTTATATAATCTCTTCTAATCCTAGTTCCACACCATCAATATTGATTTAAAGCTAAATATAGCGCTA
ACGATGCAACTCCCACCCAACTATCTCATACAAAGTCAATCATGTAAATGCCTCGACAGTTACAACCGTTCAGTAAGATAGAATTATCAAACACAAAAAC
CTGTATCGAACGTTAATAATTCCAAAATCGACATTCTCTTCTCATCATTTCATTGATAAAAAACAATGACTCAAACAAGAGAAATATATCTATAGAAATG
AAAAGACCAAACAAAATAAAAAGGCATTTGCAAAATATCCATTTGGTAATTTGAATAACTGACACATCACTCAGTCTCCTCCATTCTCTATTGACACACA
GATCAGGCCATATACACATTCAGCAAGCAGCAATTCGATATTACTATTGAGATTTAGCAAAAAGATTACAAAGGAACAATTAAATTTGACAAGACCAAAA
TGAAAACGAACCTTG