« Back to Olea europaea search


Detailed information on CNT30488958


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069623Olea europaeaQuercus suber22.6726.184.03119forward
CNT30174921Olea europaeaVigna angularis22.8624.5985120forward
CNT30724806Olea europaeaLupinus angustifolius25.1415.7584.09132forward

Expression of CNT30488958

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MGLERLMGSLKSKVMRCMRMKKSYDKIEKSESMRVEIRSRKARKLIQETLRIADSPKTRSYAF*

>peptide 2 (33 aa)
LTLSSSQAPLFLSLSLKFYFFSQVNLLLWGLKG*

Sequence

>CNT30488958
CTCACACTTAGTTCTTCTCAAGCTCCTCTCTTTCTCTCTCTCTCTCTAAAATTCTACTTCTTTTCACAGGTCAACTTATTATTATGGGGCTTGAAAGGTT
GATGGGGAGCTTGAAGTCGAAAGTAATGAGGTGTATGAGGATGAAGAAATCATATGACAAGATTGAAAAGAGTGAGAGCATGAGAGTGGAAATAAGAAGC
AGAAAGGCTCGAAAGCTCATTCAAGAAACTCTCAGAATTGCAGATTCACCAAAGACCAGAAGTTATGCCTTTTAATTCCTGTTAATTACTGGATTAGTTT
TAATCCCGTGTCAAGTAAAAATACTTCTGTTTCTCTTATATATAGAAGCCTCTTTGTTTTCCTAAGTATTATATATAGTTTTTGACATCTGTAGTAGTTT
CACCTAGTTAAGATAATTTTAGTACTTCGTGTTAGAATTGAGTATGTGGTACTCTTTGATATTTTTCCGTCTGTTTTACGTTCTTTAACAAAATAAATTG
TTTGCTATAATAACATTCTCCACCA