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Detailed information on CNT30488443


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJY5|PUMP5_ARATH, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616300Olea europaeaSesamum indicum20.6711.1383.23161forward
CNT3097992Olea europaeaSolanum tuberosum15.6627.1781.15122forward
CNT3050803Olea europaeaCucumis sativus13.4829.7584.76105forward

Expression of CNT30488443

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MGMDMAGGGVKSQSRAKSLKSCLRRRRSFTLELHSDLNQIKRMCTASCNNGSNSSFKKSLKTHVDLTKNLKNLINSSLKNEK*

>peptide 2 (60 aa)
ASHAFVLSHLGYGVQHAFVVTALREREPAVGLHSDHCDVGWVPHGGANTAGYETRRDFFH*

>peptide 3 (43 aa)
MKNRKLEQESRRPIGIRVQFTGDQEIGMEAKSYRGKVGSVWPL*

Sequence

>CNT30488443
AGGCTAGCCACGCCTTCGTTCTTAGCCATTTGGGATATGGCGTCCAACACGCTTTTGTAGTTACGGCGCTGCGCGAGAGGGAGCCGGCCGTCGGCTTGCA
TTCGGACCATTGCGACGTCGGCTGGGTTCCCCACGGCGGCGCCAACACCGCCGGCTATGAGACCCGCCGAGATTTTTTTCACTAGCGGCATATTTTTGGA
ATTGGGGTCCGTCCATTTTTGTTTGAGGATTTCGTAGAGGCCCATTCTGGTGGTGGAGTAGAGTGACTGGCGGAGGACGGTGGCGGAGACGCCAGAGAAC
AGAGCGGCAACACCGTCTTGCTGAATAATTTTCATCCCAACAGACACAAGCCCCACTCGTGGTGGTGGAGGTGGAGGGAGGCTGATGTGGCCCATATGGG
GATGGACATGGCCGGTGGTGGTGTGAAAAGCCAAAGCAGGGCGAAGAGTCTGAAAAGCTGTCTGCGGCGGCGCCGGAGCTTCACCCTGGAGTTGCATTCG
GACCTTAATCAGATCAAGAGGATGTGTACTGCATCCTGCAACAATGGAAGCAATTCCTCCTTCAAAAAATCCCTTAAAACCCATGTCGATTTAACAAAAA
ATTTGAAGAATTTGATCAATTCTTCTTTAAAGAATGAAAAATAGGAAACTAGAACAAGAATCAAGAAGACCAATTGGTATTAGAGTTCAGTTCACTGGAG
ACCAAGAAATTGGAATGGAGGCCAAAAGCTATAGAGGAAAAGTGGGGAGTGTTTGGCCTTTGTGACATATGCAGAGGAA