« Back to Olea europaea search


Detailed information on CNT30487885


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 2e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381249Olea europaeaManihot esculenta7.3430.9384.47103forward
CNT30526628Olea europaeaPhaseolus vulgaris6.4931.1689.0191forward
CNT3044405Olea europaeaPrunus dulcis10.3320.0683.45145forward
CNT30159319Olea europaeaPistacia vera4.2823.6286.6760forward
CNT3091021Olea europaeaSolanum tuberosum7.9127.2181.98111forward
CNT30560985Olea europaeaActinidia chinensis11.2625.8684.18158forward
CNT30508399Olea europaeaSolanum lycopersicum5.9239.1584.3483forward
CNT30652897Olea europaeaRosa chinensis10.1222.1984.51142forward
CNT30623458Olea europaeaDaucus carota4.9221.6388.4169forward
CNT30644712Olea europaeaCannabis sativa5.6321.1284.8179forward
CNT3051199Olea europaeaCucumis sativus7.1325.3285100forward

Expression of CNT30487885

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MNGSLWQSFTSKVCGEEAFERGPDQTDRNISM*

>peptide 2 (72 aa)
MAPCGNPLLLKFVVKRHLKGDQIKQTETLACEKSHGSVFQSSTKLTQQKFVYVGKSNYSAINIRWPTEEKMN*

>peptide 3 (50 aa)
MGLFEWNSSFPEQKADIKPHITAKSPISSRYLFNNSQLVMQYQVDNIPTK*

>peptide 4 (35 aa)
MIFHLKLLSILARLKCTTLLYKIVLNQTKLATDFI*

Sequence

>CNT30487885
TTCCCATACTTGTGGCAACGTAGGTCTCAAAAGAATCCCTCTGAGAGTTTATAGACAGGGATATATTGTGCAATAAAAAAATTGTGTACATCCATACTTA
AATTCAAATCAAGAATTGGATTTTCCTATTTCGAACAAATGGATGAGTAACAGGGCAGCAGAACATTCATTGTATAAAATTGGTCTCCCTTTCTGCTAGG
ACCATACTATGGGGCTATTTGAGTGGAATTCCAGTTTCCCTGAGCAGAAGGCAGACATAAAACCTCATATCACCGCAAAATCTCCTATATCATCAAGGTA
TCTCTTCAACAACTCTCAGTTGGTAATGCAGTACCAAGTAGATAATATTCCTACAAAATAATTTAATTTGAGAATTGGAACATATGGATTATATTACCAA
AAAAGTAGCAAATTTCCTGATTCAGAAAATTGATTATTTCAGAATGTGAAATAAAATGTTTATAACTTCATTTTCTATGGTATACAGTAAAACTGTCTCA
TAGGGTGACATGATTTTCCACCTCAAGCTTTTATCAATTCTAGCTAGGTTAAAATGTACAACTCTGCTTTACAAAATTGTTCTCAACCAAACTAAGCTAG
CAACAGATTTCATATGACACTTAATTGAGAAGTGACATCAATGAATACATCCATGCTACAGGGGATTGTGAGGCCACCCATTGGATGATCAAACCCAAAT
TCTTCCTCGGCTTGACTTAACAAATCTTGAAACAAAGAATGGTTCAAGTATGATATTGGAACGATGAATCTTTTCTTTTCACCCTCCCCAACGTATACTG
CAACATGACCTTTTGGGATATCTAGTGTTGTATGGTTTCCCATTGATGAAGACCGTCTAAGAAAATTCTTGGAATGCATAATACGAGGCATGCGGATGGC
CATGGTTCTGGCAGAGTTTTTCTTTCTTGATCGAGGAAGTAAGTGGAGATTCTAGGTTGTGTGTAACAACTGAAAGCTGAGATTGTTGTGAAGGACTTAT
GTTTGTTTGGATGCTAAGATATGTCTATATATAGATGAATGGCTCCCTGTGGCAATCCTTTACTTCTAAAGTTTGTGGTGAAGAGGCATTTGAAAGGGGA
CCAGATCAAACAGACAGAAACATTAGCATGTGAGAAATCACATGGATCTGTTTTTCAATCGTCAACAAAATTGACACAACAAAAGTTTGTTTATGTTGGA
AAATCAAATTACTCAGCAATTAATATAAGGTGGCCTACAGAGGAAAAAATGAATTAAACAAAAGAACTACAGATGGAGTCATTTTTCATTGAAGTAAAGA
CTGGCCTACACTCAGAAGCATGCTTGGAGCACCTAATCTTTTCATATCAAAATTAGGTCACTGAGTGATACAGAGAAATATATTTCAGTTCACAAATGTA
GAC