CANTATAdb - search

Detailed information on CNT30487788

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30677293	Olea europaea	Setaria viridis	6.48	21.09	87.64	89	forward
CNT30183688	Olea europaea	Secale cereale	6.41	42.31	89.77	88	forward
CNT30687407	Olea europaea	Triticum urartu	6.41	34.51	89.77	88	reverse complement
CNT30148159	Olea europaea	Brachypodium distachyon	5.46	27.08	90.67	75	forward

Expression of CNT30487788

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MWAITRLVRNFCIRHISLLTMLKYHEVIEGSGDFHSFDQCIPILMENYELF*

>peptide 2 (43 aa)
MLTISNSSKKKGIWTYALIFASHFCAYELFHGYFKMKVLVLWR*

>peptide 3 (45 aa)
MSWVYVGNLDPEKLNDNLKMNSALLELSEVEKLEFLLLYYRECGL*

>peptide 4 (31 aa)
MSSPLLHLKHFVENRLALGSSGISSPFVLEI*

>peptide 5 (34 aa)
MEVESMGQRWCNRRRRWLLWFSRKIEAVDSMFCG*

Sequence

>CNT30487788
TGTTCACAAACGGGATAACATTAAATGCAATGTCTATAAGCCTAAACGAAACCTTCCCTCATGCTGACAATTTCCAATTCGTCTAAGAAAAAAGGGATTT
GGACATATGCCTTAATCTTTGCCTCACATTTCTGCGCGTACGAATTATTTCATGGCTATTTCAAGATGAAGGTGTTGGTGTTGTGGAGGTAGAAAGCATA
GAGCAGCGAAGGGACGAGATGTTGGTGGTTTAGAGTTGGAATGGAGGTAGAATCGATGGGTCAAAGGTGGTGTAACCGACGACGACGTTGGTTGTTGTGG
TTCAGCCGAAAAATAGAAGCAGTCGACAGCATGTTCTGTGGGTAGGGGAGATGGTTTTGGTGTGCTAGGCTAAGTCTGAAAAGGCCTATTAGGTTATTTG
GGGTTCTTTTGTAGTTTGGAGGTTGAAAGGTTAAATCTCTATTGATTGCGTGAGGTTCTTTATTTTTTCTTTTCGATTTGCTAAAAATAATTTCTTCCTC
ATTCCTTTGGATTTTATTTATTGTTATTTTATGCAATATATGTTCGATTTTGAGTCACTTGATTTGAAAATTAGAATATATAAATGGAAAACGTTAAATT
GATCTGCTTTAGAAGGGTGTTTTTTAAAGATGTCTTGGGTGTATGTTGGAAACTTGGATCCTGAGAAACTGAATGACAACTTGAAGATGAATTCCGCACT
TTTGGAGTTATCAGAAGTTGAAAAGCTAGAGTTTTTACTATTGTATTACCGGGAATGTGGGCTATAACTAGACTCGTAAGGAATTTTTGTATTCGGCATA
TATCCCTCTTGACTATGCTAAAATACCATGAAGTTATCGAGGGGAGTGGAGATTTCCACAGTTTTGATCAATGCATTCCTATCTTAATGGAGAATTATGA
ACTATTTTGAATTAGTTGTTTGCTACTTTGATTGTGAAAATGATCATCACATATGAATTTATCAAGGCTTCATTTAAGTAGGTAGAATCTACATTTTTGG
CTTACTATTCTATATTGTTGTTACCTTAATAGTGTACTATTCATCTTTGGGTTGATAGGTCTTTTGCTTCTATTTGTCAAACACAAGCATTTTCATAACT
GTCCTTTTTTGTTTTGGAATAGAAGTGCATTTTTTTATGTTTTATGGAACTCACTGAATTAATTATGTTGCACATCGTGGCCTGCGCCAAAATCGTGCTT
TACCCTTGATGTCCAGTCCACTGCTGCACCTCAAGCACTTCGTGGAGAACCGGCTAGCTCTAGGTTCGAGTGGCATTTCAAGCCCCTTTGTTTTGGAAAT
TTAATTCTGCCTATGACATCCTTTCATAGAAAGAGAGAAATTAATTGATGTATTTATTCGATCCGGAAGAAGT