« Back to Olea europaea search


Detailed information on CNT30487752


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30145403Olea europaeaMedicago truncatula5.0824.9188.0667reverse complement
CNT30599933Olea europaeaFraxinus excelsior37.5654.5883.23495forward

Expression of CNT30487752

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MDFFFFFFSSSLLLRGIEACRSDKIKIYLSTNYSRFFTCALN*

>peptide 2 (67 aa)
MSSKLCISSLVAHSHHHYKTFFYHQRTPSTNSKIRARKRKKRREKTGDIEDGFIEEEETLLSVSDHL*

>peptide 3 (82 aa)
MSLQWISSSSSSLLLFFSGELKHVGPIKLRSIYLQIIQDSSLAHSIDESLLNLHLLREISNGLFCFGYGDCLLIKEHGKIIS*

Sequence

>CNT30487752
GAAAAAGGAGAGAAAAAATACTAAGAAAAAGTTAATACAAAGTAAATCACATTCTCTTCCTAACACCTAAAGAAACTATAATTAGGGACAACATATAAAA
CTACATAATAAAGATAAAAAAGATAAGGTTAAGTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCTCTCTCTCCATCTATAATCTGTAGGGGAAGATCAAGA
TCTTATCTGAGGTTATTTGCAGTTATATACCTTAATTTTTGCTTTGGATTTTCCCCTTATTTCGAAGAAAAACACCTGCGCAGTAATCATCATGTCCTCC
AAACTTTGTATTTCATCATTAGTCGCACACTCTCATCATCACTACAAGACATTCTTTTACCATCAACGAACCCCATCTACAAACTCAAAGATCAGAGCAA
GAAAAAGGAAGAAAAGGAGAGAAAAAACTGGCGATATTGAAGATGGGTTCATTGAAGAAGAAGAAACCCTACTTTCTGTTTCTGATCATCTTTGAGCCAT
GAGTCTGCAATGGATTTCTTCTTCTTCTTCTTCTCTTCTTCTCTTCTTCTCCGGGGAATTGAAGCATGTCGGTCCGATAAAATTAAGATCTATCTATCTA
CAAATTATTCAAGATTCTTCACTTGCGCACTCAATTGATGAGTCTTTGCTAAATTTGCATCTACTTCGAGAAATTTCAAATGGTTTGTTTTGCTTTGGAT
ATGGTGATTGTCTACTGATTAAAGAACATGGTAAGATCATTTCTTAGCATGTGATTTGATTCTCTTTTCTTGCTTGAAAATAAATTCATGCCCCCCCCCC
CTCTAGAAGCATAATTACTAAGGTTTCTCTTTCTTTCTGTTGCCTGTTGAACCCAAATCTATGTTGGTGTAAGTTTGTGAAATCATTAAGAAGGCGAGTA
CTATAAGCATGTAAAGAATAAATGTTGTTCTTGAGAACACAAAACCGAAGTATTTCCATTTGAGTGTATGTATTGGATGCTTGTATTAATTAGAATTGTC
TGTATCTAGGGTTAAATGTTTCTTTCAGAACTTTATATACTTTGGTTTTCTGTATTGATTGGATTTGTCTGAATCTAGGGTTTGATGTTCCTTTCATATA
TTCAGATGTTTTGTCGTCAGAAATTTATTCTATATCACAGTTGAAACTAATTATTTAATTACTTTTTTGTTTAAGAATAATCTTAAATCCTTCTCCTTGT
GATTATTGCTCCAAAACACAAGGATTATAATAAAAATTTCCTTTCTTTCTCAAAACGAATATGCTAATGAAGCTTAGAGATTCGGTAAAGAGGAAGAAAC
TTATAATATCCTAGCTGC