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Detailed information on CNT30487554

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3094050	Olea europaea	Solanum tuberosum	13.49	20.05	95	80	forward
CNT30542653	Olea europaea	Brassica napus	13.32	20.2	92.41	79	forward
CNT30236394	Olea europaea	Brassica oleracea	13.32	21.35	92.41	79	forward
CNT30309894	Olea europaea	Camelina sativa	13.32	37.8	93.67	79	forward
CNT3075181	Olea europaea	Brassica juncea	13.32	21.64	92.41	79	forward
CNT30260341	Olea europaea	Brassica rapa	13.49	20.1	93.75	80	forward
CNT30597553	Olea europaea	Fraxinus excelsior	73.52	91.98	89.45	436	forward
CNT30429165	Olea europaea	Papaver somniferum	13.49	22.54	97.5	80	forward
CNT30175528	Olea europaea	Vigna angularis	12.98	24.68	96.1	77	forward
CNT30725207	Olea europaea	Lupinus angustifolius	13.49	22.22	95	80	forward
CNT30115210	Olea europaea	Eutrema salsugineum	11.13	26.83	95.45	66	forward

Expression of CNT30487554

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTKRPLCRVALASYKYRTSGRSTHFISSKQFGGGS*

Sequence

>CNT30487554
GAAAAAGAAAACAAAATTATTAAATGACTAAAAGACCCCTATGTAGGGTTGCGTTAGCCTCCTATAAATATCGAACCAGTGGCCGCTCAACCCATTTCAT
TTCATCCAAACAATTCGGCGGCGGCTCCTAAACGAATTGATAGACAGATTAACTCCGTGAAGATTTTGGGCCGACATGAGGGCTAAGTGGAAGAAGAAGC
GTATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCCAAGTAGAAGTTTGGACTAGGATACCTGAGTGGGTCCTTTTGCATGGACCAGCC
TCTTCTTCATTGGCCTTGGTTTTTCGGATGAATGGAAGGAAGTTCTGTAGAAATATGGAGTTGTCTTGTTTTCGATTATGTTCTTACTGAAGTGTTTTAG
CTTATAATTAAGGATTGTTTTGCATTATCATTTCGAATCTAAACAGATTATGAGACTTGTATTGAACCTATTCTATCTAGTCTTCGCTTATTTTTCTATA
CTTTACGGATTTTTGTTTCAGTTTTAAAATTCTGCTTCTATGTTGTGATTGCATTACACTCTTAAAAGATGTCAAAGTTTATTTTTATCATCA