Detailed information on CNT30486019


BLAST search results

BLAST vs Swiss-Prot:
sp|P06515|CHSY_ANTMA, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628476Olea europaeaVigna unguiculata29.5322.6579.53171forward
CNT30507146Olea europaeaNicotiana attenuata66.6736.2877.98386forward
CNT30647274Olea europaeaRosa chinensis33.5111.1681.44194forward
CNT3022840Olea europaeaPopulus trichocarpa49.0529.1677.82284forward
CNT30114124Olea europaeaFicus carica47.8424.1379.06277forward

Expression of CNT30486019

Peptides detected in this lncRNA

>peptide 1 (79 aa)
HQTDTLCSTTVSTVRPGPNPNSTPHSNPSPLVHSPSLVEDFLISSIINNTQALDMFPYSLKTCLVDRSFSGFRPNFDST*

>peptide 2 (37 aa)
IKLTHYAAPRSQLSGPARTRIVLPTQTLHHLCTAPPW*

>peptide 3 (53 aa)
MPLLDFSQCSSISGQEHLLGDEMLVPLHVNVLGHAQDSASSKATLSRRIIIKY*

Sequence

>CNT30486019
CATCAAACTGACACACTATGCAGCACCACGGTCTCAACTGTCAGGCCCGGCCCGAACCCGAATAGTACTCCCCACTCAAACCCTTCACCACTTGTGCACA
GCCCCTCCTTGGTAGAGGACTTCCTCATTTCATCCATAATAAACAACACACAGGCGCTCGACATGTTCCCATACTCACTTAAGACGTGCCTGGTCGACCG
AAGTTTTTCGGGCTTCAGGCCCAATTTTGACTCCACCTGATCTAAAATTGCAGGCCCACCAGGATGTGCAATCCAGAAAATTGAGTTCCAATCAGATATG
TTTAGAGGATCAAATGCCTCTTTTAGACTTTTCTCAATGTTCTTCGATATCAGGCCAGGAACATCTTTTAGGAGATGAAATGTTAGTCCCACTTCACGTA
AATGTCCTTGGCCATGCGCAAGACAGTGCCTCCAGCAAAGCAACCCTATCACGTCGAATTATTATAAAATATTAATTTATAAACGTTAAGTACTTGTGTT
TCTTAAGACATTTTGAGATGAATAAAGCTACTAGAATGGGGCCATCTCAGCCCTGCTGTTCGCCCTTTTGAGATATAAG