Detailed information on CNT304860


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524209Zea maysSetaria italica87.7613.5394.02251forward
CNT30709642Zea maysGlycine max30.0710.9884.8886forward
CNT30179070Zea maysSecale cereale71.3341.5588.24204forward
CNT30248558Zea maysAvena sativa87.7644.6685.26251forward
CNT30650801Zea maysRosa chinensis81.4717.7381.12233forward
CNT30365375Zea maysSorghum bicolor79.7240.8695.18228forward
CNT30620724Zea maysCajanus cajan56.2925.0881.37161forward
CNT30597136Zea maysOryza meridionalis79.0224.4192.04226forward
CNT30117867Zea maysOryza nivara91.2615.8591.57261forward

Expression of CNT304860

Peptides detected in this lncRNA

>peptide 1 (93 aa)
RGNEPADVCHVAEQQGPDLVGDGPEPGVIPVPRVRTATADDELGAEVKCLLLELLVVDVPRCGAHLVRQALKVDRGGGDLLTASRVVPLQARGV

Sequence

>CNT304860
TGCGCGGCAACGAGCCCGCTGATGTGTGCCATGTCGCAGAGCAGCAGGGCCCCGACCTTGTCGGCGACGGCCCTGAGCCTGGCGTAATCCCAGTCCCTCG
GGTACGCACTGCCACCGCAGATGATGAGCTTGGGGCGGAAGTCAAGTGCCTTCTCCTCGAGCTTCTCGTAGTCGATGTACCCCGTTGTGGCGCTCACCTT
GTACGGCAGGCTCTCAAAGTAGATCGAGGTGGCGGAGATCTTCTTACCGCCAGCCGTGTAGTACCCCTGCAGGCGCGTGGGGTGGC