Detailed information on CNT30485883


BLAST search results

BLAST vs Swiss-Prot:
sp|P06515|CHSY_ANTMA, E-value = 3e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700733Olea europaeaQuercus lobata56.2138.7282.21163forward
CNT30281985Olea europaeaChenopodium quinoa23.452.8589.7168forward
CNT30628820Olea europaeaVigna unguiculata58.2821.5879.88169forward
CNT3087863Olea europaeaVigna radiata22.416.986.1565forward
CNT30597791Olea europaeaFraxinus excelsior24.1423.4198.5770forward
CNT30355925Olea europaeaLactuca sativa22.4114.5186.1565forward
CNT30705527Olea europaeaPrunus avium31.7219.8782.6192forward
CNT30645210Olea europaeaCannabis sativa23.458.9886.7668forward

Expression of CNT30485883

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MQHHGLNCQAHQDVQSRKLSSNQICLEDQMPLLDFSQCSSISGQEHLLGDEMLVPLHVNVHQLH

Sequence

>CNT30485883
CCTTGAGATAATAATAGAACTTATTTTCATTATAGTAGCATTACTTGATACATAGCGTATCATGTGCAACACAATTTGTCCATCAAACTGACACACTATG
CAGCACCACGGTCTCAACTGTCAGGCCCACCAGGATGTGCAATCCAGAAAATTGAGTTCCAATCAGATATGTTTAGAGGATCAAATGCCTCTTTTAGACT
TTTCTCAATGTTCTTCGATATCAGGCCAGGAACATCTTTTAGGAGATGAAATGTTAGTCCCACTTCACGTAAATGTCCATCAATTGCACC