Detailed information on CNT30485866


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30345946Olea europaeaEragrostis tef4.0949.1585.52145forward
CNT30577123Olea europaeaOryza barthii3.2430.0384.35115forward

Expression of CNT30485866

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MTFPHQQPPCSPNNCLGVGLLMLSSQIYKKSPRKFIFITTFHQLS*

>peptide 2 (49 aa)
MLGHLGRVGFFLLFSYYSISLAKIGYKMYMISLLDYGIFIVLAFESCFS*

>peptide 3 (79 aa)
MLLDFIIKNLLQSLSRCPLYKVKNTFSLNNFLNNIRGKFSGRSINSFQQELDSSCSNSCFFYSNLHIASSEASKLFTVH*

>peptide 4 (96 aa)
MKESKVPAQLLQYVSSIAWLFHVQPCTPHSPCMPYITNGQNISGHCPVTKNLDAGALGTGWIFSPFFILQYIIGQNWIQNVYDKFIGLWNFYCTCI*

>peptide 5 (29 aa)
MYKKFTPRIKLVLSQQPKHIPGENQSDSQ*

>peptide 6 (45 aa)
MIDLSDLINQIDTTSHYSLAEPIKKSQGIPKNFRFMFVPTLNPLF*

>peptide 7 (43 aa)
MGRERAWSKRLRIHLRLFWMEIRWRFTAQKSLWAWILNDRYTK*

>peptide 8 (34 aa)
MKTILHTWGVLELFMFRTQQLHLLVQHYTSIMPF*

>peptide 9 (33 aa)
MEHSYSLRHVLNRRVHTNQLGPKHGYVICVSIK*

Sequence

>CNT30485866
AGCCCTTATGTGCCATGCATAATTGGGCGCAACGCAAGATCACAAAAAAATAAGCGAGCGCAGGCGGATAATCTATAAATATAGTAAAACCAACTTTTAA
CCTCATGAACTTTTAACCTCACTTCACTGGGAGAAATATACAGTACTATCTTGGCGTCCTCGTATAATAATCGAATACAACTAGTTATACCTACGCAAAC
CATTAAAAACATGTTGATCGCAAAAATAGGTAATGTTTTCCTGGACAAGACCAAAAAATGTCACAAAGTGAGAATGCGGACAAGCAACTAGAAATCCTGC
TAAAAGACACTTCTGTTAAGAGTAACTGGTCATTCTGAAGATTTGTTTGTATTAGTTTACTCCAATGTCTAGCGATATATATAACTTGTTCTCAAATCAC
TCGATTTAAAAAAAAAAAAAAATAAGAGAGAGAAAAAAAAAAAAAGATTCTTGTAAATATTGCACTGTAAACAAACACTACCAAGGGGCCTCAAATACTC
AATTTCCTCTGGAGATCATTTATGTAAACACTTGAATCCAATTTAAACAAAAATGTTCTACATACAACAAAACGTTCTACCACACTCCTTCAAGGGGTCT
CGTTGATATATGAGAGAATCTCTACTACTACGTTAGTGATGAATGACTAATAATAATACATAATCCAGTATAAATCAAGCCAACAACACGGGAAACAGCA
GCTAAATATCCCCTCCATGACATTCCCACATCAACAGCCACCATGTAGCCCGAACAACTGTTTGGGGGTGGGGCTACTTATGCTCTCCTCTCAGATATAC
AAGAAATCCCCCAGAAAATTTATATTTATCACAACTTTTCATCAGCTTTCATAGCCTTCCCAGATACAGATTATATTCACAAGACAGAACAATTATTTTC
CTGCTTCCAGAGCAATTACACTCCAACAAAGGAAGATTTCAGGAGAGAAAAACAATCGCTTTTAATGGGCAATGAATGGGATTATCACATGCTAATATAA
ATGCCAAGACTACAAACTCTTAATTTATCACTAATACTAGAATGTCTTTATTCTATACATGACACGTAGGTTTAACGTAATACTATAGCAGTAGGTGACA
TTCTGTACTTATGATGCACCGACATGGACACTTATGCCTGAACAATACGAGTCGAACATGTTGACACACGATTGTTCAAAAAAGTACCAATAGGACACGT
CACCGACGCATTGATTGAATTCTTTAAAATTCTTCATTTATATAATATAAATTTACTTTTACACTTAAACTTGTTATTAACTTTTATTGTTTAAATCCTT
TAAATATAGTATATATTTGTTATTTACTAATAATTTTGAATTAAAATATATAATATTTTTAATAAAAAAGAAAAATATTTAATAAGAGTGTCCGAGAAGT
GTCGACGAGAAGTATCGATATCGACACGTATTCGATACAGACACACTACCCTAATTGAAGCGTCTGTGCTACAGAGATTTGTACAAATGCATATAACCAG
CAAATAATATTAATTGCAAGTCTAAAAACAAGATCAAGGAACAAAACATGTAAGTTTCTTGTTTCAATTAACCTTCCTACAGAAAAAGAAAATCACAATA
GGGGAAATGCAAATTGAATTAAATAACGAGTAAACGCTCAAACAATATGAAAAAATTGAAAACAAACAATATTTACCATCCATAATGTTATCAGTAAACC
TCTTCTTGCATTTGCAGACGAGATAATTATCTTCACGTAGAACAAAGCTCAGATTTGAACATAATGATGAACTTCATGGAGTATAAAAATGTCGTGTGAA
ATTTTTCCATCAAGAAAATTTCTAGTAATCTAGTATGGAGCACTCATATTCCTTGCGACATGTATTAAATAGGAGGGTACACACCAATCAATTGGGACCC
AAACATGGATACGTGATATGCGTGTCAATTAAATAGTGGCATGAAAACTATACTCCATACTTGGGGAGTACTAGAATTGTTTATGTTCAGAACTCAACAG
TTACACCTACTTGTTCAACACTATACTTCAATTATGCCCTTCTAAAAGGAACATCAGCTCTAACAATTCCGCCGCCGTCTACCAAAACAATTGGAAATGT
TTCAAAAAAAGTAGGCATACGATGTACAAAAAGTTCACGCCAAGGATAAAATTGGTTCTATCACAGCAGCCAAAGCATATCCCAGGAGAGAATCAATCAG
ATAGCCAATGAAAGAGAGTAAAGTGCCAGCCCAGCTCCTTCAATATGTGTCCAGCATTGCCTGGCTTTTTCATGTCCAACCATGCACCCCACACAGCCCG
TGCATGCCATACATAACTAATGGCCAAAACATATCCGGCCATTGTCCAGTGACCAAAAATTTGGATGCTGGGGCACTTGGGACGGGTTGGATTTTTTCTC
CTTTTTTCATACTACAGTATATCATTGGCCAAAATTGGATACAAAATGTATATGATAAGTTTATTGGATTATGGAATTTTTATTGTACTTGCATTTGAGT
CCTGTTTTTCTTAATCTGTTTCTAAAAGAAACCTCGTTTTGATTGGAGATCCATCTCTTTGGTTGATTATATAGTATCTCAAAATCCAAAATGCTAAAAA
TCCTCTCATTTTTCTAATGAGAAATCAAATGTGAATCCTAATTTTAGGATGACTGACCCTTCAGTCCAGTCATTTTGGGGGAAAAAACATTAGACATTCC
ATTTTCTGAACAAACACAAGTATTATTTGTCGCACAATAGTTTCTATAAGCTTATCATAATCTGCACAATCTGAAATGATAGACCTTTCGGATCTTATTA
ACCAAATAGACACAACTTCGCACTATAGTTTAGCTGAACCAATCAAGAAGTCCCAAGGCATTCCCAAGAACTTTCGTTTTATGTTTGTTCCAACCCTCAA
CCCTCTTTTCTAGATTCATCAATATTGAATCGATTGAACAAGCTTACAGCCCCCAATCGGATGCTACTGGATTTCATCATCAAAAATCTCCTCCAATCAT
TATCAAGGTGCCCTCTATATAAGGTTAAAAATACATTTTCTCTAAACAATTTTCTGAATAACATTAGAGGAAAATTTTCAGGTAGGAGCATAAATTCCTT
CCAACAGGAGTTAGATTCATCTTGCTCAAATAGTTGTTTCTTCTATTCCAATCTTCATATTGCAAGTTCTGAAGCCTCCAAATTGTTTACCGTACATTAA
AAATATTTTATATAGCTTCATATGGAGAGACATGAACAGCCATAGTCAACTGCACTGGGTATCTTGGCAGAAGCTGTGTTATTCATGGGCAGAGAGAGGG
CTTGGAGTAAGAGATTAAGGATCCATCTAAGATTGTTCTGGATGGAAATACGATGGAGGTTTACAGCACAAAAGTCTCTTTGGGCCTGGATCTTAAATGA
TAGATACACAAAGTAGGTGATTTCCAGCAGAGGTTAGAAATAACAGGTCTAAAATCTGAAAATGTCTTACTAAGACATATGACCTGCGGGATATATATTG
CTTGGAAATTAGAAGAGAATTAAATAAACTTCTGGAAAAGGAGAGGG