Detailed information on CNT3048583


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCSAT001352, E-value = 2e-92

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503443Prunus dulcisNicotiana attenuata50.494.0888.99318forward
CNT30311863Prunus dulcisCamelina sativa60.8623.5289.32384forward
CNT3060130Prunus dulcisArabidopsis lyrata52.1435.8889.67329forward
CNT3083474Prunus dulcisBrassica juncea60.8611.589.58384forward
CNT30229832Prunus dulcisAnanas comosus61.3332.9183.46387forward
CNT30655378Prunus dulcisRosa chinensis71.1630.2493.54449forward
CNT3025585Prunus dulcisPopulus trichocarpa39.6259.3889.2250forward
CNT30336888Prunus dulcisCynara cardunculus59.911.8387.3378forward

Expression of CNT3048583

Sequence

>CNT3048583
TTATCTNTTTTATTTAACAGAAAAGGAATGAAAGAGTTTGCCTTTTTTGTTTTATCAACAGATAGAACTAAATACAAGTAAAGTAAGTTCTTATTATNTC
CTCGTCTACAAATATCCAAATTTTGATGCCTAATACCCCATAGATAGTTCGAACTGCGTAGGCACAATAATCAATTTTAGCTCGAATGGTTTGTAGAGGA
ACCCTACCTTCTCTGATCCATTCAACACGTGCAATTTCTTTTCCGTCGATACGCCCTGCAATTTGTACTTGAATTCCTTTTGTACCTGCCTGTTCAGTTA
ATTCAATAGCTTTTTTCATTGCTTTGCGAAATGAAACTCTATTCTTTAATTGTCCGGCTATAAATTCTGCAAGAATATTGGGGTGCCCATAGGGATTTGA
AANTTCTTCTAATAGCAATGTTGAGTTTTCGGTTTACATAATTGAGNTTCTTTTTGTACATTCATCTGTAATTCTTCGATTCTTCTAGTCCTGTCTTCTA
TTAATAACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAATCTCTATACGTGCAATTCCCTCGACATTAGAGGATATTTTCATA
TTCTTTTGTACATAATTTTTGATACAATCTC