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Detailed information on CNT30485406


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30117377Chara brauniiOryza nivara12.9128.9288.1459forward

Expression of CNT30485406

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MGSTQKRSTPPCQRHTTRGRSRRRASSAPRGQSCPLLPALPICHSG

Sequence

>CNT30485406
GGAGTCTCAGAGCGATAGAAGGGGGGGGGCGAAGGAATTCAAGCAGGGGGCAAGGACAGGAATGTAAAAGGGCAATCACTTGCTGAGGGTCTGGATGATG
GTGGTGTGCCACGGGTCAGACAAGTGGGTCAGCAGATTGGCGAAGGGGCCATCGCCAGTAAGCTTGGACTGCACAACGTAGCCGAGGAAGGCAAGCATAG
CAAGACGGCCATTAGCGATCTCCTTCTCCTTGGCCTCAAAGCTGGCGGCAAATCCGAGGGGGTTGAAGATTCCACCGGGGTAGCCGACGTCGCCGGGGGG
AAGCTTGTTGCCCTTGAAAATGGGGTCGACGCAGAAGCGAAGTACTCCACCTTGCCAGCGTCATACCACAAGGGGGCGTTCCAGACGCCGAGCTTCGTCA
GCACCTCGGGGACAATCATGCCCGCTACTCCCAGCATTGCCCATCTGCCATTCTGGA