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Detailed information on CNT30484721


BLAST search results

BLAST vs Swiss-Prot:
sp|P60112|ATP9_ARATH, E-value = 1e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670953Chara brauniiSetaria viridis18.6825.3584.19234forward
CNT30550185Chara brauniiIpomoea triloba11.5734.2882.07145forward
CNT3020733Chara brauniiCitrullus lanatus9.9827.2383.2125forward
CNT30628273Chara brauniiDaucus carota11.6523.9783.56146forward
CNT30596430Chara brauniiOryza meridionalis17.426.3682.57218forward
CNT30104589Chara brauniiOryza rufipogon18.6853.6784.62234forward
CNT3039551Chara brauniiMarchantia polymorpha10.6939.0782.84134forward

Expression of CNT30484721

Peptides detected in this lncRNA

>peptide 1 (43 aa)
VTNAQRICRRGCSTSCVLLRTAHHNQIVASPMKDFVQQNESKN*

Sequence

>CNT30484721
TCGTGACCAACGCCCAGAGAATATGTCGACGAGGGTGCAGCACTTCGTGTGTCCTCTTACGCACGGCGCACCATAACCAAATAGTTGCTTCGCCAATGAA
GGATTTCGTGCAACAGAATGAATCAAAGAACTAAACACGTTTCCAATACCTACAGCGGCTCCAGCTAATGCGATTGTTGCACAGCCCGCTCCAATTAATT
TTGCACCTTCTAACATAGCCAATTGCCCTCTTCTACTGGGCCTCATAAAGCATTGCGCAAAGTACGAAATTGGAAAAACACAAAATGGTTAGTGAAGGGC
GAAGCTCAGTGTATAAGCGGCGCCTTGTTATCACGAATTCAAGATACAGATTTTAAGTCTGTCGTGTTTACCATTTTCACCAAGTGAGCTTGATTTCAAA
CTATTGTAGCTATATGCTATATATGGTAAACCAGCCAGGCGCCTGGACCTGACAATACCACACGTGTTTGTAAGTTACAAACGGGAGTCAGGTGAGTTTG
GCGACGAGTCGCTGCGGCGCCCTAAACCAGGCGACTCTGGCGATAGAGCAGACGCGGCGCATTAAGACGAAGCGTAGAAAGATGCATAAATAAAGCACGT
CCGCCGAATGGAGAATGGAATACATACCTTTATCATTTGTAGCGATTATATGGTCTTAATATGACACGAAGTGTTACCTATCTACTTCTCCGAACACAAT
ATCCTGAGTACCTATGATAGTAACCACATCTGCGAGCATGTGATGTTTCGACATAAAATCAAGCCCTTGTAAATGAGCAAAACCAGGTGCTCGAATTTTA
CAACGATAAGGACGATTGGTTCCGTTGCTAACTAAATATACACCAAATTCTCCTTTGGGTGCTTCTACACAGGTGTACGTAGAAGAAGCTGGTACAGACA
CACCCTCCTGTCTCTTATACACATCTAGATGTGTATAAGAGACAGGTTTACGATCATCCGCTTTGATGTAAAGCTTAAAGTGATGAATTAAGGATTCCAT
GGATTGTTTCATTTGAGAGCGTGAAGGAGGACAAAGTTTACGATCATCCGCTTTGATCATGCCACTAGGCATTTGATTCAAGCATTGGACAATGATTCGA
AGACTTTGTCGCATTTCTTCAATGTGGACACAATAACGATCATAACAATCTCCTCGTGTACCTACGGGTACATCAAATTCTACTTTGTCATAAACATCGT
AGGGTGCTGCTTTTCGCAAATCCCAGGAAACCCCTGAACCTCTTAACACTCAG