Detailed information on CNT30481824


BLAST search results

BLAST vs Swiss-Prot:
sp|P26858|COX3_MARPO, E-value = 1e-28

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197849Chara brauniiPisum sativum30.112.8384.9593forward
CNT30227733Chara brauniiAnanas comosus21.043.3890.7765reverse complement
CNT30627905Chara brauniiDaucus carota20.062.4788.7162reverse complement
CNT30679552Chara brauniiTriticum urartu30.16.7587.193forward
CNT3035080Chara brauniiCucumis melo30.11.7887.193forward
CNT30725625Chara brauniiLupinus angustifolius23.954.2687.8474reverse complement

Expression of CNT30481824

Peptides detected in this lncRNA

>peptide 1 (42 aa)
GSMSLIGFPFLTGFYSKDVILELAYTTYYITPPYKHGIQNHS*

>peptide 2 (46 aa)
RQHVFNWISFFNWILFEGCDLRTCLYHVLHHATIQTWYTKSFLNLN*

Sequence

>CNT30481824
TAGGCAGCATGTCTTTAATTGGATTTCCTTTTTTAACTGGATTTTATTCGAAGGATGTGATCTTAGAACTTGCTTATACCACGTATTACATCACGCCACC
ATACAAACATGGTATACAAAATCATTCCTAAACCTAAACTAAGGCACAGCGTACCTCCTGTATAAGAATGCATGTACATAACACCACCAATGGTACTTGC
CAAAGCTCCCAGTGAACCAAAAATAGGCCATGGACTTGGATCAACTAAATGATAAGGATGCTTTTGAGAACTCATACTCATTGCTTCGCTCCTTTGATAT
GGTTTAGGA