Detailed information on CNT30481523


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272552Chara brauniiChenopodium quinoa27.085.1796.9265reverse complement
CNT30730494Chara brauniiCorchorus capsularis27.087.3995.3865reverse complement
CNT30284510Chara brauniiTriticum aestivum21.6720.6396.1552forward
CNT30391333Chara brauniiTriticum turgidum27.0810.8395.3865forward
CNT30569398Chara brauniiActinidia chinensis27.083.3395.3865reverse complement
CNT30442196Chara brauniiAegilops tauschii27.087.6795.3865forward
CNT30656195Chara brauniiTriticum dicoccoides27.0825.2995.3865forward
CNT303548Chara brauniiZea mays27.084.5695.3865forward
CNT30215809Chara brauniiHelianthus annuus27.089.1895.3865reverse complement
CNT30688674Chara brauniiTriticum urartu27.084.9495.3865reverse complement
CNT30347837Chara brauniiEragrostis tef27.088.4393.8565forward
CNT30354697Chara brauniiLactuca sativa27.089.2195.3865reverse complement
CNT30410880Chara brauniiPapaver somniferum27.087.1796.9265reverse complement
CNT30642274Chara brauniiCannabis sativa27.58.0892.4266forward
CNT3036965Chara brauniiCucumis melo27.088.9395.3865reverse complement
CNT30104374Chara brauniiOryza rufipogon27.084.8993.8565forward
CNT30604015Chara brauniiOryza punctata27.0813.4695.3865forward

Expression of CNT30481523

Peptides detected in this lncRNA

>peptide 1 (31 aa)
HVVVEGYLEETSLLIIRIHSIHFLRYCYLCF*

Sequence

>CNT30481523
GGCATGTGGTCGTTGAGGGGTATCTTGAAGAAACTTCCCTGCTGATAATCCGAATTCATTCAATTCATTTCCTACGCTATTGTTACTTATGTTTTTGATT
AGAAACTACGGATGTCCCAACATATAGCCAAATTTTCTACTTTATTTTCCCATTACTGGACGATTGCCCCGATTTGAGGTGCCAAACCTTCCCGTCGATG
TTAACTCTTGGGGAAGATCAGCCTGTTATYCCTAGAGTAA