Detailed information on CNT3048148


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641813Prunus dulcisNymphaea colorata71.8366.1295.051132forward
CNT30165771Prunus dulcisPistacia vera71.9562.993.121134reverse complement
CNT30147369Prunus dulcisMedicago truncatula49.6210097.44782forward
CNT3077806Prunus dulcisBrassica juncea51.490.696.79810forward
CNT30650539Prunus dulcisRosa chinensis65.6171.8697.781034forward
CNT30369025Prunus dulcisSorghum bicolor85.66100.4594.891350forward
CNT30705847Prunus dulcisPrunus avium98.8699.9497.691558forward
CNT3027140Prunus dulcisPopulus trichocarpa63.278.9297.09996forward
CNT30117075Prunus dulcisOryza nivara77.2898.7895.41218forward

Expression of CNT3048148

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRQHDGCAIRRVIMNHQSNGQSPRQPFI*

>peptide 2 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSLA*

>peptide 3 (43 aa)
MIRFSGLLATSRAANHPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 4 (43 aa)
PTETLLRLLLPLNDKVQWTSRDVAGSEPPTPPRSEHFTGPFNR*

>peptide 5 (44 aa)
MHPFQKPGFVARISSRITTVIRVVDTIKQTITDLMSHSQLHSLN*

>peptide 6 (44 aa)
MLSQLFAFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQQNRTVIL*

Sequence

>CNT3048148
CACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCACCCACGCCGCCGCG
ATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACT
AGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGT
TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCCT
CTAAGAAGCTGGCCGCGGAGGGATCCTCCGCATAGCTAGTTAGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGA
CCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGTAACATCCGCCGATCCCTGGTCGGCATCGCTTATGGT
TGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGCCTTTCA
TAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACAGAATAGGACCGTA
ATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCACCGGAGGCACGACCCCGCCA
ATTAAGGCCAGGAGCGTATCGCCGGCGGACCGGTCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACCGCAACAACTTAAATATACGCTATTGGAGC
TGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTTATTCCAATTACCAGACTCTAAGAGCCCG
GTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCCCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCT
CCGGAATCGAACCCTAATTCTCCGCCACCCGTCACCACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGATGCGCCGC
CAGCACGATGGCTGTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGCCAGCCTTTTATCTAATAAATGCATCCCTTCCAGA
AGCCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCA
GCTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGG