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Detailed information on CNT30480474


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376476Arabidopsis halleriArabidopsis thaliana81.940.8291.58380forward
CNT30712062Arabidopsis halleriGlycine max31.0326.4780.56144forward

Expression of CNT30480474

Peptides detected in this lncRNA

>peptide 1 (33 aa)
WVDRSSTYESRRNLPATNIEKKAERDRNIKLSA*

Sequence

>CNT30480474
GGTGGGTAGATAGATCAAGCACATACGAATCTAGAAGGAACCTTCCTGCCACAAACATTGAGAAGAAGGCTGAGAGAGACAGGAACATTAAGCTTAGTGC
CTAAAACATTTGCCTTTAGGGCGGTGCAGAGACAAGCCGCAGCCTCAACATCAACCAGACCCTTGAGGAGGGAGCAACAAGGCTTGACTGGTGGTGTGCC
CAACTGGATTTTGAGAAGGTCCTTGAGAACATTGGCGCAAACGCCGAGCTTGAGAGTGTCTCTTGGGCAGCTTCCGGTGGACTTGGGCTTAGGCTTGGGT
TTAGGGGTTGGACTGCAGCCACCGCCACACGCGGTGGTCAAGGTGAAGAAGAGGATGTTGAATGTGAGGAAAATGACAAGGGAGGCTGAGATTTTTGAAG
CCATCTTTCGAAATATATATATATTTCTATTTTAGGTAAGAAGTTTTATGATAGAAGTATTGCT