Detailed information on CNT30479986


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673865Arabidopsis halleriSetaria viridis35.24.794.3288reverse complement
CNT30708350Arabidopsis halleriGlycine max51.616.1589.15129reverse complement
CNT30556102Arabidopsis halleriOryza glaberrima4016.3494100reverse complement
CNT30627901Arabidopsis halleriDaucus carota49.210.5195.93123reverse complement
CNT30362263Arabidopsis halleriSorghum bicolor40.411.6894.06101reverse complement
CNT30595932Arabidopsis halleriOryza meridionalis407.5295100reverse complement
CNT30318962Arabidopsis halleriAsparagus officinalis51.66.1991.47129reverse complement
CNT30147869Arabidopsis halleriBrachypodium distachyon4028.7494100reverse complement
CNT30726606Arabidopsis halleriLupinus angustifolius5211.0390.77130reverse complement

Expression of CNT30479986

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KVYVRPQWENKMEHLTTYLHRPRTTKSPLSFWGDGGIVPFELFSCYLSLDSK*

Sequence

>CNT30479986
CCAAGGTTTATGTTCGGCCTCAATGGGAAAATAAAATGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAAATCACCCCTTTCATTCTGGGG
TGACGGAGGAATCGTACCGTTCGAGCTTTTTTCATGTTATCTATCTCTTGACTCGAAATGAGAGCCTTTTTCATGTTAGAGTGTCTAAGGTTAGGCCAGT
AGGGTCTCTTAACACCCTTTTTTTTCTCATCGAAGTTATTTCACAAATAC