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Detailed information on CNT30479862


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541074Arabidopsis halleriBrassica napus100.65100.6587.34308forward
CNT30235645Arabidopsis halleriBrassica oleracea100.65100.3387.66308forward
CNT3060868Arabidopsis halleriArabidopsis lyrata10010095.75306forward
CNT30261535Arabidopsis halleriBrassica rapa100100.6686.27306forward
CNT30716661Arabidopsis halleriMalus domestica golden34.9734.5285.05107forward

Expression of CNT30479862

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MREAGFTEQRLLPAYSSGRITVRRRPDPLWPAGSISPEPPF

Sequence

>CNT30479862
GTCGAGCTAAGTAACGAGAGCTTGTGACCCGAGTGGGGACTGTAAGGTGGTGGAACAATGGTTCGATTCCACGGGTCGGATCTGGTGTTGGCAAGTTTCT
GAGCTGCCCAGTCCAAGCTGTGAGTAATCCGTGTGGGTTGAGCGAAGGCTTGGCTCAGGCGGGTTCTAAAGTTGGAGGGTAATGCGTGAGGCTGGTTTCA
CAGAGCAGCGACTACTTCCCGCTTACAGCAGTGGACGGATCACAGTTCGGCGTCGCCCAGATCCACTATGGCCCGCTGGTTCGATCTCACCTGAACCACC
ATTTTT