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Detailed information on CNT30479687


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Arabidopsis halleriArabidopsis thaliana95.1698.6690.51295reverse complement
CNT3060682Arabidopsis halleriArabidopsis lyrata99.68100.3290.94309forward
CNT3050966Arabidopsis halleriCucumis sativus19.6822.4393.4461reverse complement

Expression of CNT30479687

Peptides detected in this lncRNA

>peptide 1 (46 aa)
YSVTRACDPSGENRVMGRWVDLIGPGSRDGLYSDLTTPSWELRYGL*

Sequence

>CNT30479687
TACTCAGTAACTCGGGCTTGTGATCCTAGTGGAGAAAATAGGGTGATGGGACGTTGGGTCGATCTCATTGGGCCGGGTTCGCGGGATGGGCTATATTCTG
ACCTGACCACTCCAAGTTGGGAGTTGAGGTATGGGCTTTGAGCGAAGGCTTGGATCTCATGTCTTTTAGAGTGGGAGAGACTGCGTGAGAGGCTGGTTTC
ACAGAGCAGCGTCCACCTCCCGCTTTTGACGGTGGAAGGATTACGGGCCATTTGCCTTCCGAACCCCCACTATGATCCAATAAGCCGACTCCGATTGGAC
CATCACTTTT