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Detailed information on CNT30479631


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJU4|ALFP1_ARATH, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697185Arabidopsis halleriOryza sativa18.3433.5982.31130forward
CNT30640852Arabidopsis halleriNymphaea colorata17.0734.8785.95121forward
CNT30373585Arabidopsis halleriArabidopsis thaliana26.3876.0291.44187forward
CNT30235921Arabidopsis halleriBrassica oleracea15.515088.18110forward
CNT30261311Arabidopsis halleriBrassica rapa20.3137.890.97144forward
CNT3040010Arabidopsis halleriMarchantia polymorpha16.9326.3785.83120forward

Expression of CNT30479631

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MPGTMFCSTRTSTIFLPSVVDWYKVSSNRIAPEMYCPSPGADTSNVRCFDEFVGVSRSGTDGERGRCHVAANS*

Sequence

>CNT30479631
CCTGTTTTCATAAAGACACTCATAGATTCCATTTAAACTGAACCAAACCCGAACCAAATCTCAACCGGAATAAAGATTTTCAAACGGGCATAAAATTTCG
GTTCTACTTCGAATCCATCTCCCAAATCTTGAAACACGACAAACGGAACCAAATCTAAAGTTGGGACATTTTCAATCGAACCAAACTAAACCAGATTTTG
TTTGTAAACCGATCAAATGAATGAACCAAACCGAAACAAACTAAAATTCCAACTCGGTAAGGATATACCGGACCTAAACCAAAATGCAAAAACCTAGCTA
GGTTTTACTACATACAATACATACCTTGTCGACTTTGATGCCAGGGACGATGTTCTGCTCAACGAGAACATCAACCATTTTCTTGCCGTCGGTGGTGGAT
TGGTACAAAGTCTCCTCGAACAGGATAGCTCCGGAGATGTACTGTCCCAGTCCTGGAGCCGACACAAGCAACGTCCGCTGTTTTGACGAGTTCGTCGGCG
TAAGCAGAAGCGGCACGGACGGTGAGAGAGGAAGGTGCCACGTGGCTGCGAATAGCTGAGACAGAGGAAGGTTGACGACGGAGGAGGAGACTCTGTCCCT
TAACCCAATCAGATTTCACCGGTGAGGCTTTGAGCATAGTGGCTGCAGTGCTTGACGCCATTGTTGCTTGCTAGTATCTTCGAGTGAGAGCTTAAAACGC
TTGTAACGC