Detailed information on CNT3047959


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30537800Prunus dulcisEucalyptus grandis27.154.2188.97145reverse complement
CNT30550185Prunus dulcisIpomoea triloba21.9127.6693.16117reverse complement
CNT3020733Prunus dulcisCitrullus lanatus20.4123.7594.5109reverse complement
CNT30221525Prunus dulcisHordeum vulgare21.3513.5689.47114reverse complement
CNT3062667Prunus dulcisArabidopsis lyrata21.3520.9283.33114reverse complement
CNT30141896Prunus dulcisLolium perenne20.048.8688.79107reverse complement
CNT30688279Prunus dulcisTriticum urartu21.3510.7891.23114reverse complement
CNT3036889Prunus dulcisCucumis melo20.416.3285.32109reverse complement
CNT30104673Prunus dulcisOryza rufipogon21.3516.2689.47114reverse complement

Expression of CNT3047959

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVEGAKSIGAGAATIASAGAAIGIGNVFSSLIHFVAR

Sequence

>CNT3047959
GAGCTTCCCCCTAATGAAAGACTAGTGGGAGTAGAAAAGCCCAAACCAGGGTTCCCCTCAGAATTTAACCTGTAATAAGAGAAAGATCCCTGTCTATCAC
AGGGGTATCCCAATAGTCTGACCCTACTCTACTTCCGAGTTAGAAGGGCCTTGGTTGGAACGCGGTGCTCGGGCGCTCGATAACCCCCGAACATCTACGG
GGGAGGAGTCCCTCGAGAGGCTTTTCGCGATATTGGACGCACTCTGGGAGGGCGGACGACAGTCAGAGGCGTCCGCGAAGCTGATCGCAAAATTGTAGAA
TTCCGACGAATAGGCCACAACAAGTGAGATACCCAAGATAAAAGGAACGAGGGGCAGAATCGACGAGGAATCAATCACATAAAATCGTGAATGAAAAAGC
GTGACGAGAATTCTTAACTCGAGATGGTAGAGGGTGCAAAATCAATAGGTGCCGGAGCTGCTACAATTGCTTCAGCGGGAGCTGCTATCGGTATTGGAAA
CGTGTTCAGTTCTTTGATCCATTTCGTGGCCAGA