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Detailed information on CNT304795


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 8e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639966Zea maysNymphaea colorata30.319.1384.67137forward
CNT30533721Zea maysEucalyptus grandis28.3218.3485.94128forward
CNT30698134Zea maysQuercus lobata31.427.6282.39142forward
CNT3021623Zea maysCitrullus lanatus24.788.2585.71112forward
CNT30730016Zea maysCorchorus capsularis24.7816.9282.14112forward
CNT30712288Zea maysGlycine max31.4224.6181.69142forward
CNT3042792Zea maysPrunus dulcis31.8639.0281.25144forward
CNT30294278Zea maysTriticum aestivum67.2670.5389.8304forward
CNT3075006Zea maysBrassica juncea26.9927.1181.15122forward
CNT30261201Zea maysBrassica rapa26.9913.7481.15122forward
CNT30129085Zea maysCorymbia citriodora28.3212.1686.72128forward
CNT30597198Zea maysOryza meridionalis21.687.3193.8898forward
CNT30644515Zea maysCannabis sativa29.4223.0181.95133forward
CNT3027985Zea maysTheobroma cacao31.4226.1584.51142forward
CNT30319122Zea maysAsparagus officinalis31.649.6786.01143forward
CNT30582394Zea maysEchinochloa crusgalli72.1287.489.26326forward
CNT30112090Zea maysFicus carica26.335.8187.39119forward
CNT3040359Zea maysMarchantia polymorpha24.7814.9583.93112forward

Expression of CNT304795

Peptides detected in this lncRNA

>peptide 1 (52 aa)
QVTSQSIHVQRNCMYPRCSSLLKWHTFARREEDRRRSYIIYMHLYEFVFYLK*

>peptide 2 (45 aa)
PSYIPIHPCAEELHVSTMLVTAEMAYLCTQRGGSEAELYYIYASL*

Sequence

>CNT304795
CCAAGTTACATCCCAATCCATCCATGTGCAGAGGAATTGCATGTATCCACGATGCTCGTCACTGCTGAAATGGCATACCTTTGCACGCAGAGAGGAGGAT
CGGAGGCGGAGCTATATTATATATATGCATCTTTATGAATTTGTATTCTACTTGAAGTAGTAGGGGAGGTCGAGCACGTAGAGGAGGAAGTATGCCCAGA
GCACGCCGGAGATACCACCGAAGAAGAACCCTCCGGTGAACTTGGCCCAGCCGTCGGCGGTCTGCAGCTTGTCGGCCTCCTTCTTCCGGCCGGTGAGCGT
GAGCGGCCCGACGAGGAGGTAGCCGTGGGCGAGGCCGACCTCGACGCCCCGCAGCAGCGGGCTCACGGCGGTGCGGTAGGCCGGCAGGTTGGAGAGGTAC
CACGCGATGAGCGGGCTGGAGGTGACGGGCGTCTCCAGGCTGCCGATGAACG