Detailed information on CNT3047926


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FF29|PR5K_ARATH, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315005Prunus dulcisCorylus avellana26.714.1485.1474reverse complement
CNT3071936Prunus dulcisQuercus suber26.7130.7186.4974reverse complement
CNT30711018Prunus dulcisGlycine max28.8816.0383.7580reverse complement
CNT30652116Prunus dulcisRosa chinensis45.8518.9383.46127reverse complement

Expression of CNT3047926

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MKLVGTIQVPVHQVVQNLKRLVWLQCKLSVLILVTMWLYVREI*

>peptide 2 (91 aa)
MMTVALWCVQMKPSEHPSMNKVVEMLKGDIENLQMPRRPSLYPQQTPADEVGGDNPSPCASSGSKFEEISLVAMQIKCFNISHDVAVCKGNL

Sequence

>CNT3047926
ATGATGACGGTGGCATTATGGTGCGTACAAATGAAGCCCAGTGAACACCCTTCAATGAATAAAGTAGTGGAGATGCTCAAAGGAGACATTGAGAACCTTC
AAATGCCTCGAAGGCCTTCCTTATATCCACAACAAACTCCTGCAGATGAAGTTGGTGGGGACAATCCAAGTCCCTGTGCATCAAGTGGTTCAAAATTTGA
AGAGATTAGTTTGGTTGCAATGCAAATTAAGTGTTTTAATATTAGTCACGATGTGGCTGTATGTAAGGGAAATTTAG