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Detailed information on CNT3047896


BLAST search results

BLAST vs Swiss-Prot:
sp|Q08298|RD22_ARATH, E-value = 2e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3033699Prunus dulcisTheobroma cacao21.477.5381.9105forward

Expression of CNT3047896

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MADGYCFNLHPIIGFQGENISFCLFYCMAEKHSIGIVLLMTHNDFVT

>peptide 2 (48 aa)
MKWQMGVVPGLTLRIWKDICSGSHSDVSRWQMVTALTFIPSSAFRERT*

Sequence

>CNT3047896
AAATAAGTAGGGAGATAATTATGCAGGCCTAGGGTGCAACCCGACCAAGCTTATTATACGTACAGTGCTAAGTGATGATCATGCAGATTTGTGTTTTGGA
ACCCAGGCAATAGCATCAGTGGAAATGAAATGGCAGAAATAAGTAGGGAGATAATTATGCAGGCCTAGGGTGCAACCCGACCAAGCTTATTATACGTTCA
GTGCTAAGTGATGATCATGCAGATTTGTGTTTTGGAACCCAGGCAATAGCATCAGTGGAAATGAAATGGCAGATGGGAGTGGTTCCGGGCTTAACGTTGA
GGATTTGGAAGGACATATGCTCTGGGTCCCATTCTGATGTGTCTAGATGGCAGATGGTTACTGCTTTAACCTTCATCCCATCATCGGCTTTCAGGGAGAG
AACATAAGCTTCTGTTTGTTTTATTGCATGGCAGAAAAACACAGCATAGGGATAGTTCTCCTTATGACACACAACGACTTTGTCACCTG