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Detailed information on CNT30478207


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375095Arabidopsis halleriArabidopsis thaliana25.4537.0284.24184forward
CNT30310517Arabidopsis halleriCamelina sativa37.6223.0380.88272forward

Expression of CNT30478207

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLLLHRQSTSSLLSRPFPFPLHLEVESLFSKHFLYTVH*

Sequence

>CNT30478207
AAGCATGTTCCATACAATACAATGATCTCTAATAATACATGAAGTTCAACTTTTTCACTCTGTCTTTAAGTGCTTGACAAGCTCATCTAATGCGTTATAT
GAGGAGCCTCCACTCCTTACAGAGGCTTTGAGCTTCTCTCTCAAACCGAGGGCTCTCTCCCTCATGCATGCTCCTTCTTCATCGACAATCAACCTCTTCA
CTGCTCTCTCGACCGTTCCCCTTTCCACTTCACCTTGAAGTAGAATCCCTATTTTCCAAACACTTTTTATATACTGTACATTGAGTTTAACTTCTACTCA
CCAATAAAAGGCCTGCAAATCATTGGAACTACTTCCACAGTGCTCTCGAGTGTTGAGTTCCATCCGCAGTGGCTCCAACGGGTGTAACAACTAAAAGTGG
ATGGTCGTGAGATATGTTTCGGATATCTTCAACAACTGGGAAGCTTGTGCCTCTACACAAGGAAAGGCAAAGAGTCTTTGGGAGTAATTAGTGCCATTCA
ACGCAACTCCTATCCTCTTGTAGTAAACTAGGTCCAGGCGATGAAGCTGTAATGTGAAGAGGGCCTAATGGATACACTGGAATTCCGAGTTCTTGTTGCA
TCCATGACAGAGTCAAGCTCTCTAGACAACTTGCCGTATTGATGATAATAGCGGAAGCTGTTCTTTTGTTAACTACTTCCCAACACATCTCCAAAAGTGG
CTCTAATGGCCCAAATCCTAAAG