Detailed information on CNT30478156


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3085023Arabidopsis halleriVigna radiata22.8113.4386.1565forward
CNT30145769Arabidopsis halleriMedicago truncatula24.9119.5185.9271forward
CNT30325169Arabidopsis halleriAsparagus officinalis21.7523.487.162forward
CNT3035626Arabidopsis halleriCucumis melo21.7511.0787.162forward

Expression of CNT30478156

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PRRPTLAQAPPPALVSVWLLKPMTVKTVTYRKRKVAMNSAMTAL*

Sequence

>CNT30478156
GCCTAGGAGGCCGACACTGGCACAAGCTCCACCACCAGCGTTGGTATCCGTCTGGCTCTTAAAGCCGATGACTGTCAAAACGGTGACATATAGAAAGAGG
AAAGTAGCTATGAACTCAGCGATGACAGCTCTGTAGAAGGACCACTTCTTGAGCTCTCTCACCTCGAACGTCTTCACAGGCGGTTTAGCCTCACGGACTG
AGAGAGAGAGAGAAGAGAGAGACTGTTAGAAGATGTGGATGATGTGCGAAGATGGTGAGTGGGTGTATTTATAGAAAGATGTGGC