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Detailed information on CNT30477887


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VYN9|PHO32_ARATH, E-value = 9e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377538Arabidopsis halleriArabidopsis thaliana9.1120.497.5641forward

Expression of CNT30477887

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDLDVGKLRMIGIWIHDFFQMLFCSSESE*

Sequence

>CNT30477887
CCTCTACTTCCCATAATCACAGCACTAAGACCAAGCCTCTCAATCTCAAGACATAATCTCTCCCTCATATCATGATCTTTCACTATATGGATCTTATAAG
GAAACCCTAATTCCTTCAACGGCTTAGCTAGATCCGCAACTTTTGTTGAAGTAAAAGCATCAAAATCTTCTTGACTAGGCTGAGATTGAGCGTTTGGATC
TTCCACAGAAGGAGCTTTCTTCAGAGAGATCAACGGCGACTCCGATTTTACGACGAGCTCCGGCAGTTGGAGTTGGAGTTGCGGCGGAGGAGGGAGTGGA
AGAGGAGTGGTGGTGGTGAGAGTGACGTGGAGATGGAGGGTGATGGATCTTGATGTTGGGAAGCTGAGGATGATCGGAATCTGGATTCATGATTTTTTTC
AGATGTTGTTTTGTTCGTCGGAAAGTGAATGAAATGAAAGAGTGAGAGAG