Detailed information on CNT30477847


BLAST search results

BLAST vs Swiss-Prot:
sp|Q32RY7|RBL_STAPU, E-value = 6e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677554Arabidopsis halleriSetaria viridis71.8258.9688.61158forward
CNT30636042Arabidopsis halleriCapsicum annuum48.184.7985.85106forward
CNT30226496Arabidopsis halleriHordeum vulgare64.5561.2183.8142forward
CNT30258743Arabidopsis halleriAvena sativa90.9133.2886.5200forward
CNT30606537Arabidopsis halleriGossypium raimondii85.4511.1892.55188forward
CNT30129054Arabidopsis halleriCorymbia citriodora37.276.1190.2482forward
CNT30627897Arabidopsis halleriDaucus carota82.7312.0993.96182forward
CNT30622174Arabidopsis halleriCajanus cajan92.2727.8892.61203forward
CNT30596588Arabidopsis halleriOryza meridionalis74.5570.6984.76164forward

Expression of CNT30477847

Peptides detected in this lncRNA

>peptide 1 (56 aa)
TARSRPSLRACTHASRATRLATAPGAFPQGWPKVPPPNCSTESSPKISVKAGICQT*

>peptide 2 (31 aa)
CKITSLITSLYTCFQSYSVSYGTRCISPRVA*

Sequence

>CNT30477847
ACTGCAAGATCACGTCCCTCATTACGAGCTTGTACACATGCTTCCAGAGCTACTCGGTTAGCTACGGCACCCGGTGCATTTCCCCAAGGGTGGCCTAAAG
TTCCTCCACCGAATTGTAGTACAGAATCATCTCCAAAGATCTCGGTCAAAGCAGGCATATGCCAAACGTGAATACCCCCTGAAGCGACAGGCAGAACACC
TGGTAGTAAAACAGAGTGTA