« Back to Arabidopsis halleri search


Detailed information on CNT30477818


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Arabidopsis halleriNymphaea colorata38.8942.6282.97182forward
CNT30515406Arabidopsis halleriJuglans regia39.5336.4281.08185forward
CNT30376473Arabidopsis halleriArabidopsis thaliana98.565.6788.94461forward
CNT30269143Arabidopsis halleriChenopodium quinoa36.3221.8879.41170forward
CNT30380725Arabidopsis halleriManihot esculenta32.9126.183.77154forward
CNT30403648Arabidopsis halleriBeta vulgaris40.1716.9580.32188forward
CNT30505774Arabidopsis halleriNicotiana attenuata44.2343.3181.64207forward
CNT30171560Arabidopsis halleriTrifolium pratense41.4524.0781.44194forward
CNT30145699Arabidopsis halleriMedicago truncatula31.6228.0884.46148forward
CNT3061459Arabidopsis halleriArabidopsis lyrata45.0936.0198.1211forward
CNT30651308Arabidopsis halleriRosa chinensis32.6926.5681.7153forward
CNT30358694Arabidopsis halleriLactuca sativa40.8142.9282.2191forward
CNT30411270Arabidopsis halleriPapaver somniferum41.4534.5881.44194forward
CNT30113105Arabidopsis halleriFicus carica38.8922.7579.12182forward
CNT3049718Arabidopsis halleriCucumis sativus36.1132.3884.02169forward

Expression of CNT30477818

Sequence

>CNT30477818
CACTCTGTAAAACTGGTAGGTAATCTTGTACTTGGATCTAAGCCTTGTCCCCAAAGCTAAACACTGTTCTTTCCTAGCTAGCTTCAGCAGATTCGGACCT
TCTCTCATGATCGCTGCACCTCCTGTCGGCATCTCAAAGATCTGTTCTTTTGGTGAGTTCCATGTAATAACGTAGAACTCTTCCACTTGTGCTTTACGTA
GAAGACCACCGACGGTGTGTTTGGGTCTAGCTGCGGTGGCGTGAATCCCACGGGAGCTTCTTTCACGGCGGGGGCTGCAGCGGCTTTGGAATCTGTTTTC
TCGGCGCGGATTGAGGTTTTGGTGAAGGAGAGGGATTTCGGACGGTGGGTTGTTGAGAAAAAGTGGAGTTTCTTGACGCCGGAGGTTGCGGCGGTTGTTA
TGGCGGAGTTGAAGATCCCGGCGGCTTGAGTTGCCATTGTTTTTTTCTTTCTTTGTTCTCTAATGAGC